使用scikit-cuda用cuSOLVER计算奇异值分解

时间:2015-10-30 10:45:14

标签: python cuda svd pycuda cusolver

我正在尝试将scikit-cuda的包装器用于cuSOLVER函数,特别是我想执行cusolverDnSgesvd来计算实数矩阵上的全矩阵单精度SVD。

使用代码herehere作为参考,我设法做到了这一点:

import pycuda.autoinit
import pycuda.driver as drv
import pycuda.gpuarray as gpuarray
import numpy as np

from skcuda import cusolver


handle = cusolver.cusolverDnCreate()

m = 50
n = 25

a = np.asarray(np.random.random((m, n)))
a_gpu = gpuarray.to_gpu(a)

ldu = m
ldvt = n

s_gpu = gpuarray.empty(min(m, n), np.float32)
u_gpu = gpuarray.empty((ldu, m), np.float32)
vh_gpu = gpuarray.empty((n, n), np.float32)

work_size = cusolver.cusolverDnSgesvd_bufferSize(handle, m, n)

work = gpuarray.empty((m,n), np.float32)

u_gpu, s_gpu, vh_gpu = cusolver.cusolverDnSgesvd(
    handle=handle,
    jobu='A',
    jobvt='A',
    m=m,
    n=n,
    A=a,
    lda=m,
    S=s_gpu,
    U=u_gpu,
    ldu=ldu,
    VT=vh_gpu,
    ldvt=ldvt,
    Work=work,
    Lwork=work_size,
    rwork=None,
    devInfo=0
)

但代码不起作用,可能是因为我弄乱了类型。

Traceback (most recent call last):
  File "/home/vektor/PycharmProjects/yancut/test_svd.py", line 44, in <module>
    devInfo=0
  File "/home/vektor/anaconda3/lib/python3.4/site-packages/skcuda/cusolver.py", line 577, in cusolverDnSgesvd
    int(A), lda, int(S), int(U),
TypeError: only length-1 arrays can be converted to Python scalars

我应该如何提供所有参数,以便以正确的方式执行SVD?

UPDATE1: 在使用this问题作为参考后,我编辑了代码并收到了新错误。

import pycuda.autoinit
import pycuda.driver as drv
import pycuda.gpuarray as gpuarray
import numpy as np

import ctypes

from skcuda import cusolver

rows = 20
cols = 10

a = np.asarray(np.random.random((rows, cols)))
a_gpu = gpuarray.to_gpu(a.copy())
lda = rows

u_gpu = gpuarray.empty((rows, rows), np.float32)
v_gpu = gpuarray.empty((cols, cols), np.float32)
s_gpu = gpuarray.empty(cols, np.float32)
devInfo = gpuarray.zeros(1, np.int32)

handle = cusolver.cusolverDnCreate()

worksize = cusolver.cusolverDnSgesvd_bufferSize(handle, rows, cols)
print("SIZE", worksize)

Workspace = gpuarray.empty(worksize, np.float32)

svd_status = cusolver.cusolverDnSgesvd(
    handle=handle,
    jobu='A',
    jobvt='A',
    m=rows,
    n=cols,
    A=a_gpu.ptr,
    lda=rows,
    S=s_gpu.ptr,
    U=u_gpu.ptr,
    ldu=rows,
    VT=v_gpu.ptr,
    ldvt=cols,
    Work=Workspace.ptr,
    Lwork=worksize,
    rwork=Workspace.ptr,
    devInfo=devInfo.ptr
)
status = cusolver.cusolverDnDestroy(handle)

我收到了新错误

Traceback (most recent call last):
  File "/home/vektor/PycharmProjects/yancut/test_svd.py", line 53, in <module>
    devInfo=devInfo.ptr
  File "/home/vektor/anaconda3/lib/python3.4/site-packages/skcuda/cusolver.py", line 579, in cusolverDnSgesvd
    Lwork, int(rwork), int(devInfo))
ctypes.ArgumentError: argument 2: <class 'TypeError'>: wrong type

现在看来,我对devInfo

做错了

1 个答案:

答案 0 :(得分:2)

documentation看起来每个矩阵(所以ASUVT)都需要作为设备指针传递。因此对于PyCUDA gpuarrays,传递A.ptr而不是A。它应该工作。