在R中安装生物导体

时间:2013-06-25 14:58:15

标签: r installation bioconductor

我在R中安装bioconductor包时遇到了一些麻烦,它挂在“测试是否可以加载已安装的软件包”部分

    source("http://bioconductor.org/biocLite.R")
    #Installing package into ‘/homexxx/lib/R’
    #(as ‘lib’ is unspecified)
    #trying URL 'http://www.bioconductor.org/packages/2.12/bioc/src/contrib/BiocInstaller_1.10.2.tar.gz'
    #Content type 'application/x-gzip' length 13424 bytes (13 Kb)     
    #opened URL
    #==================================================
    #downloaded 13 Kb
    #
    #* installing *source* package ‘BiocInstaller’ ...
    #** R
    #** inst
    #** preparing package for lazy loading
    #** help
    #*** installing help indices
    #** building package indices
    #** testing if installed package can be loaded
    #^C
    #No traceback available
    #* removing ‘/home/xxx/lib/R/BiocInstaller’
    #
    #The downloaded source packages are in
    #        ‘/tmp/Rtmpb2nVhP/downloaded_packages’
    #'biocLite.R' failed to install 'BiocInstaller', use
    #  'install.packages("BiocInstaller",
    #  repos="http://www.bioconductor.org/packages/2.12/bioc")'

这是R版本:

R --version
R version 3.0.1 (2013-05-16) -- "Good Sport"
Copyright (C) 2013 The R Foundation for Statistical Computing
Platform: x86_64-pc-linux-gnu (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under the terms of the
GNU General Public License versions 2 or 3.
For more information about these matters see
http://www.gnu.org/licenses/.

0 个答案:

没有答案