我正在使用性能分析chart.correlation程序来处理13个变量。我想从上象限中删除有意义的星星。
我已尝试使用...,然后根据读取此程序包使用的依赖项添加“ stars = FALSE”和其他组合。这是一个基本问题,如果回答,它将教给我自己和其他人如何正确查找依赖关系以及如何在R程序包中更改依赖关系。
library(PerformanceAnalytics)
my_data <- mtcars[, c(1,3,4,5,6,7)]
chart.Correlation(my_data, histogram = TRUE, pch = 19)
正如预期的那样,有亮红色的星星代表着明显的p值。感谢他们在使它们消失方面的任何帮助。
答案 0 :(得分:0)
如果查看chart.Correlation
的代码,您会发现星星是通过symnum()
生成的。您可以创建该函数的副本,并对此进行注释,并调用text()
将该函数排除在外。
chart.Correlation.nostars <- function (R, histogram = TRUE, method = c("pearson", "kendall",
"spearman"), ...)
{
x = checkData(R, method = "matrix")
if (missing(method))
method = method[1]
panel.cor <- function(x, y, digits = 2, prefix = "",
use = "pairwise.complete.obs", method = "pearson",
cex.cor, ...) {
usr <- par("usr")
on.exit(par(usr))
par(usr = c(0, 1, 0, 1))
r <- cor(x, y, use = use, method = method)
txt <- format(c(r, 0.123456789), digits = digits)[1]
txt <- paste(prefix, txt, sep = "")
if (missing(cex.cor))
cex <- 0.8/strwidth(txt)
test <- cor.test(as.numeric(x), as.numeric(y), method = method)
# Signif <- symnum(test$p.value, corr = FALSE, na = FALSE,
# cutpoints = c(0, 0.001, 0.01, 0.05, 0.1, 1), symbols = c("***",
# "**", "*", ".", " "))
text(0.5, 0.5, txt, cex = cex * (abs(r) + 0.3)/1.3)
# text(0.8, 0.8, Signif, cex = cex, col = 2)
}
f <- function(t) {
dnorm(t, mean = mean(x), sd = sd.xts(x))
}
dotargs <- list(...)
dotargs$method <- NULL
rm(method)
hist.panel = function(x, ... = NULL) {
par(new = TRUE)
hist(x, col = "light gray", probability = TRUE,
axes = FALSE, main = "", breaks = "FD")
lines(density(x, na.rm = TRUE), col = "red", lwd = 1)
rug(x)
}
if (histogram)
pairs(x, gap = 0, lower.panel = panel.smooth, upper.panel = panel.cor,
diag.panel = hist.panel)
else pairs(x, gap = 0, lower.panel = panel.smooth, upper.panel = panel.cor)
}
chart.Correlation.nostars(my_data)