我正在尝试安装Perl模块Bio :: Tools :: Run :: Alignment :: Muscle。我正在使用此docker映像:
FROM ubuntu:16.04
RUN echo 'debconf debconf/frontend select Noninteractive' | debconf-set-selections
RUN apt-get update && apt-get install -y software-properties-common
RUN apt-add-repository multiverse
RUN add-apt-repository restricted
RUN apt-get update && apt-get install -y \
wget \
unzip \
sudo \
make \
gcc \
libdb-dev \
libgd-dev \
zlib1g-dev \
libxml2-dev \
libexpat1-dev \
pkg-config \
graphviz \
libssl-dev \
cpanminus
# Dependencies
RUN cpanm File::Sort Config::Any Bio::FeatureIO Bio::Cluster::SequenceFamily
# Install problematic ::Muscle
RUN cpanm Net::SSLeay LWP::Protocol::https Bio::Tools::Eponine
RUN cpanm Bio::DB::EUtilities # Ensembl requirement
当我尝试通过输入容器并键入“ cpanm Bio :: Tools :: Run :: Alignment :: Muscle”来安装cpanm时,出现以下错误:
Test Summary Report
-------------------
t/Eponine.t (Wstat: 65280 Tests: 2 Failed: 0)
Non-zero exit status: 255
Parse errors: Bad plan. You planned 7 tests but ran 2.
Files=70, Tests=2068, 15 wallclock secs ( 0.32 usr 0.09 sys + 12.22 cusr 1.33 csys = 13.96 CPU)
Result: FAIL
Failed 1/70 test programs. 0/2068 subtests failed.
-> FAIL Installing Bio::Tools::Run::Alignment::Muscle failed. See /root/.cpanm/work/1552304305.41131/build.log for details. Retry with --force to force install it.
是否可以调试此方法,并检查是否可以忽略?