Question

我已经安装了qdap：

install.packages("qdap")

需要一段时间才能下载所有内容，但控制台会填满所有下载内容，最后我收到这样的消息：

Warning in install.packages :
  installation of package ‘qdap’ had non-zero exit status

The downloaded source packages are in
    ‘/tmp/RtmpeTzuKz/downloaded_packages’
> library(qdap)
Error in library(qdap) : there is no package called ‘qdap’
>

This SO帖子让我尝试添加dependencies = TRUE，但问题仍然存在。

这是会话信息

sessionInfo():
> sessionInfo()
R version 3.4.0 (2017-04-21)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.2 LTS

Matrix products: default
BLAS: /usr/lib/openblas-base/libblas.so.3
LAPACK: /usr/lib/libopenblasp-r0.2.18.so

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8       
 [4] LC_COLLATE=en_US.UTF-8     LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=en_US.UTF-8       LC_NAME=C                  LC_ADDRESS=C              
[10] LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] compiler_3.4.0 tools_3.4.0

我昨天发现的另一篇文章（现在用谷歌搜索找不到它）建议我删除我的库目录中的现有qdap文件，关闭我的会话，重新启动和全新安装。没有一个包完全称为qdap，但有一些在我删除的名称中有qdap。我的问题仍然存在，我无法安装qdap。

我不确定提供哪些其他信息？任何帮助表示赞赏。

以下是尝试安装qdap时生成的错误：

./ configure：第3736行：/ usr / lib / jvm / default-java / jre / bin / java：否这样的文件或目录没有配置：错误：Java解释器 '/ usr / lib / jvm / default-java / jre / bin / java'不起作用错误：包“rJava”的配置失败 *删除'/home/myname/R/x86_64-pc-linux-gnu-library/3.4/rJava'在install.packages中的警告：安装包'rJava'已经非零退出状态错误：依赖'rJava'不可用包'openNLPdata' *删除'/home/myname/R/x86_64-pc-linux-gnu-library/3.4/openNLPdata'警告在install.packages中：安装包'openNLPdata'了非零退出状态错误：依赖'rJava'不可用包'xlsxjars' *删除'/home/myname/R/x86_64-pc-linux-gnu-library/3.4/xlsxjars'在install.packages中的警告：安装包'xlsxjars'已经非零退出状态错误：依赖'rJava'不可用包''venneuler' *删除'/home/myname/R/x86_64-pc-linux-gnu-library/3.4/venneuler'警告在install.packages：安装包'venneuler'了非零退出状态错误：依赖项'openNLPdata'，'rJava'是不适用于“openNLP”套餐 *删除'/home/myname/R/x86_64-pc-linux-gnu-library/3.4/openNLP'在install.packages中的警告：'openNLP'软件包的安装有非零退出状态错误：依赖项'rJava'，'xlsxjars'不是可用于'xlsx'包 *删除'/home/myname/R/x86_64-pc-linux-gnu-library/3.4/xlsx'在install.packages中的警告：包'xlsx'的安装有非零退出状态错误：依赖关系'openNLP'，'venneuler'， 'xlsx'不适用于'qdap'包 *删除'/home/myname/R/x86_64-pc-linux-gnu-library/3.4/qdap'在install.packages中警告：安装包'qdap'已经非零退出状态

由于这看起来像是一个rJava问题，我发现了this帖子并在终端中尝试了最高投票答案：

apt-get install r-cran-rjava

导致：

E: Could not open lock file /var/lib/dpkg/lock - open (13: Permission denied)
E: Unable to lock the administration directory (/var/lib/dpkg/), are you root?

我希望在没有root用户的情况下解决这个问题？我对linux并不熟悉。我可以安装其他p包。

Answer 1

There is a solution for this issue when you have no root access.

Download Java (make sure to install JDK) and install it inside your $HOME

You can do that as Oracle's Java is just a tar.gz package

Make sure to set JAVA_HOME

export JAVA_HOME=$HOME/opt/my_jdk_installation

Once you have Java you have to reconfigure R

Simply tell R where your Java is

R CMD javareconf \
JAVA_HOME=${JAVA_HOME} \
JAVA=${JAVA_HOME}/bin/java \
JAVAC=${JAVA_HOME}/bin/javac \
JAVAH=${JAVA_HOME}/bin/javah \
JAR=${JAVA_HOME}/bin/jar \
JAVA_LD_LIBRARY_PATH=${JAVA_HOME}/jre/lib/server \
JAVA_CPPFLAGS="-I${JAVA_HOME}/include -I${JAVA_HOME}/include/linux"

Since now, R should use your personal installation of Java. This way, you don't depend on sys admin.

库中的错误（qdap）：没有名为'qdap'的包

1 个答案: