在码头工人集装箱上的zeppelin中运行火花时找不到lzo

时间：2016-12-30 09:32:23

标签： hadoop apache-spark cloudera-cdh apache-zeppelin

我试图将火花塞代码运行到zeppelin中，我得到了这个： java.lang.ClassNotFoundException：找不到类com.hadoop.compression.lzo.LzoCodec

与zeppelin嵌入式火花相同的问题以及我自己安装的火花壳（1.6.3）

Conf：

  • 来自debian的码头工人：jessie
  • zeppelin版本：0.6.2（从tar安装，不是从源代码构建）
  • cdh version：5.9.0
  • liblzo2-dev和hadoop-lzo安装在容器上
  • SPARK_HOME和HADOOP_HOME设置为env vars，也设置为conf / zeppelin-env.sh
  • lzo lib路径： /usr/lib/hadoop/lib/hadoop-lzo-0.4.15-cdh5.9.0.jar
  • compression.codecs属性位于core-site.xml和mapred-site.xml
    • 中

代码： 

%spark
val bankText = sc.textFile("/tmp/bank/bank-full.csv")

case class Bank(age:Integer, job:String, marital : String, education : String, balance : Integer)

// split each line, filter out header (starts with "age"), and map it into Bank case class  
val bank = bankText.map(s=>s.split(";")).filter(s=>s(0)!="\"age\"").map(
    s=>Bank(s(0).toInt, 
            s(1).replaceAll("\"", ""),
            s(2).replaceAll("\"", ""),
            s(3).replaceAll("\"", ""),
            s(5).replaceAll("\"", "").toInt
        )
)

// convert to DataFrame and create temporal table
bank.toDF().show()

错误： 

bankText: org.apache.spark.rdd.RDD[String] = /tmp/bank/bank-full.csv MapPartitionsRDD[1] at textFile at <console>:29
defined class Bank
bank: org.apache.spark.rdd.RDD[Bank] = MapPartitionsRDD[4] at map at <console>:33
java.lang.RuntimeException: Error in configuring object
    at org.apache.hadoop.util.ReflectionUtils.setJobConf(ReflectionUtils.java:109)
    at org.apache.hadoop.util.ReflectionUtils.setConf(ReflectionUtils.java:75)
    at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:133)
    at org.apache.spark.rdd.HadoopRDD.getInputFormat(HadoopRDD.scala:188)
    at org.apache.spark.rdd.HadoopRDD.getPartitions(HadoopRDD.scala:201)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
    at scala.Option.getOrElse(Option.scala:120)
    at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
    at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
    at scala.Option.getOrElse(Option.scala:120)
    at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
    at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
    at scala.Option.getOrElse(Option.scala:120)
    at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
    at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
    at scala.Option.getOrElse(Option.scala:120)
    at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
    at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
    at scala.Option.getOrElse(Option.scala:120)
    at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
    at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
    at scala.Option.getOrElse(Option.scala:120)
    at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
    at org.apache.spark.rdd.MapPartitionsRDD.getPartitions(MapPartitionsRDD.scala:35)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:239)
    at org.apache.spark.rdd.RDD$$anonfun$partitions$2.apply(RDD.scala:237)
    at scala.Option.getOrElse(Option.scala:120)
    at org.apache.spark.rdd.RDD.partitions(RDD.scala:237)
    at org.apache.spark.sql.execution.SparkPlan.executeTake(SparkPlan.scala:190)
    at org.apache.spark.sql.execution.Limit.executeCollect(basicOperators.scala:165)
    at org.apache.spark.sql.execution.SparkPlan.executeCollectPublic(SparkPlan.scala:174)
    at org.apache.spark.sql.DataFrame$$anonfun$org$apache$spark$sql$DataFrame$$execute$1$1.apply(DataFrame.scala:1500)
    at org.apache.spark.sql.DataFrame$$anonfun$org$apache$spark$sql$DataFrame$$execute$1$1.apply(DataFrame.scala:1500)
    at org.apache.spark.sql.execution.SQLExecution$.withNewExecutionId(SQLExecution.scala:56)
    at org.apache.spark.sql.DataFrame.withNewExecutionId(DataFrame.scala:2087)
    at org.apache.spark.sql.DataFrame.org$apache$spark$sql$DataFrame$$execute$1(DataFrame.scala:1499)
    at org.apache.spark.sql.DataFrame.org$apache$spark$sql$DataFrame$$collect(DataFrame.scala:1506)
    at org.apache.spark.sql.DataFrame$$anonfun$head$1.apply(DataFrame.scala:1376)
    at org.apache.spark.sql.DataFrame$$anonfun$head$1.apply(DataFrame.scala:1375)
    at org.apache.spark.sql.DataFrame.withCallback(DataFrame.scala:2100)
    at org.apache.spark.sql.DataFrame.head(DataFrame.scala:1375)
    at org.apache.spark.sql.DataFrame.take(DataFrame.scala:1457)
    at org.apache.spark.sql.DataFrame.showString(DataFrame.scala:170)
    at org.apache.spark.sql.DataFrame.show(DataFrame.scala:350)
    at org.apache.spark.sql.DataFrame.show(DataFrame.scala:311)
    at org.apache.spark.sql.DataFrame.show(DataFrame.scala:319)
    at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:36)
    at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:41)
    at $iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:43)
    at $iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:45)
    at $iwC$$iwC$$iwC$$iwC.<init>(<console>:47)
    at $iwC$$iwC$$iwC.<init>(<console>:49)
    at $iwC$$iwC.<init>(<console>:51)
    at $iwC.<init>(<console>:53)
    at <init>(<console>:55)
    at .<init>(<console>:59)
    at .<clinit>(<console>)
    at .<init>(<console>:7)
    at .<clinit>(<console>)
    at $print(<console>)
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.apache.spark.repl.SparkIMain$ReadEvalPrint.call(SparkIMain.scala:1065)
    at org.apache.spark.repl.SparkIMain$Request.loadAndRun(SparkIMain.scala:1346)
    at org.apache.spark.repl.SparkIMain.loadAndRunReq$1(SparkIMain.scala:840)
    at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:871)
    at org.apache.spark.repl.SparkIMain.interpret(SparkIMain.scala:819)
    at sun.reflect.GeneratedMethodAccessor46.invoke(Unknown Source)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.apache.zeppelin.spark.Utils.invokeMethod(Utils.java:38)
    at org.apache.zeppelin.spark.SparkInterpreter.interpret(SparkInterpreter.java:953)
    at org.apache.zeppelin.spark.SparkInterpreter.interpretInput(SparkInterpreter.java:1168)
    at org.apache.zeppelin.spark.SparkInterpreter.interpret(SparkInterpreter.java:1111)
    at org.apache.zeppelin.spark.SparkInterpreter.interpret(SparkInterpreter.java:1104)
    at org.apache.zeppelin.interpreter.LazyOpenInterpreter.interpret(LazyOpenInterpreter.java:94)
    at org.apache.zeppelin.interpreter.remote.RemoteInterpreterServer$InterpretJob.jobRun(RemoteInterpreterServer.java:341)
    at org.apache.zeppelin.scheduler.Job.run(Job.java:176)
    at org.apache.zeppelin.scheduler.FIFOScheduler$1.run(FIFOScheduler.java:139)
    at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.access$201(ScheduledThreadPoolExecutor.java:180)
    at java.util.concurrent.ScheduledThreadPoolExecutor$ScheduledFutureTask.run(ScheduledThreadPoolExecutor.java:293)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)
Caused by: java.lang.reflect.InvocationTargetException
    at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
    at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
    at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
    at java.lang.reflect.Method.invoke(Method.java:498)
    at org.apache.hadoop.util.ReflectionUtils.setJobConf(ReflectionUtils.java:106)
    ... 98 more
Caused by: java.lang.IllegalArgumentException: Compression codec com.hadoop.compression.lzo.LzoCodec not found.
    at org.apache.hadoop.io.compress.CompressionCodecFactory.getCodecClasses(CompressionCodecFactory.java:135)
    at org.apache.hadoop.io.compress.CompressionCodecFactory.<init>(CompressionCodecFactory.java:175)
    at org.apache.hadoop.mapred.TextInputFormat.configure(TextInputFormat.java:45)
    ... 103 more
Caused by: java.lang.ClassNotFoundException: Class com.hadoop.compression.lzo.LzoCodec not found
    at org.apache.hadoop.conf.Configuration.getClassByName(Configuration.java:1980)
    at org.apache.hadoop.io.compress.CompressionCodecFactory.getCodecClasses(CompressionCodecFactory.java:128)
    ... 105 more

我在这里找到了一些信息：link但似乎不适合我，或者我做错了。

有什么想法吗？

感谢

1 个答案:

答案 0 :(得分：1)

经过多天的研究，我终于从源码（从v0.6.2标签）构建了zeppelin，它可以使用所有相同的配置！

我认为二进制包是针对特定版本的cdh和hadoop（在发行说明中没有关于此的信息）所以如果你有问题我鼓励你构建zeppelin而不是使用二进制文件！

希望它会有所帮助

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