我正在研究在循环中生成刻面直方图。当我在循环中调用facet_wrap时会出现问题。我尝试了不同的选项,但所有选项都失败了,并显示以下消息:
layout_base中的错误(data,vars,drop = drop):至少一个图层必须包含用于构面的所有变量
以下是可重现的例子。
library(ggplot2)
library(scales) #date_format
## Reproducible example
datatest <- data.frame(
column1 = sample(c("yes", "no"), 50, replace = TRUE),
column2 = sample(c("yes", "no"), 50, replace = TRUE),
column3 = sample(c("yes", "no"), 50, replace = TRUE),
column4 = sample(c("yes", "no"), 50, replace = TRUE)
)
#This function will generate a uniform sample of dates from
#within a designated start and end date:
rand.date=function(start.day,end.day,data){
size=dim(data)[1]
days=seq.Date(as.Date(start.day),as.Date(end.day),by="day")
pick.day=runif(size,1,length(days))
date=days[pick.day]
}
#This will create a new column within your data frame called date:
datatest$date=rand.date("2016-01-01","2016-09-21",datatest)
## Simple frequency plot that works well
histotest <- ggplot(datatest, aes(x = date)) +
geom_histogram(binwidth = 7, fill="#2a87c8", colour="white") +
scale_x_date(limits = c(Sys.Date() - 250, NA), labels = date_format("%b %Y")) +
labs(x = "Period", y = "Count") +
facet_wrap(~ column1 , ncol=1) +
theme(plot.title=element_text(face="bold", size=9),
panel.grid.major = element_line(colour = "white"),
panel.grid.minor = element_blank())
ggsave("out/column1_histo.png", plot=histotest, width=12, height=6,units="in", dpi=300)
问题出现了:
## Same plot generated through a loop
## The pb is with the facet_wrap
for (i in 1:4 ) {
rm(variablename)
variablename <- names(datatest)[i]
## histogramme to display event occurence over time
histoloop <- ggplot(datatest, aes(x = date)) +
geom_histogram(binwidth = 7, fill="#2a87c8", colour="white") +
scale_x_date(limits = c(Sys.Date() - 250, NA), labels = date_format("%b %Y")) +
labs(x = "Period", y = "Count") +
## I tried different options but none of them is working
## If I comment the facet_wrap everything's fine...
facet_wrap(~ variablename , ncol=1) +
#facet_wrap(~ names(datatest)[i] , ncol=1) +
#facet_wrap(~ aes_string(names(datatest)[i]) , ncol=1) +
theme(plot.title=element_text(face="bold", size=9),
panel.grid.major = element_line(colour = "white"),
panel.grid.minor = element_blank())
ggsave(filename=paste("out/",variablename,"_histo.png",sep=""), plot=histoloop, width=12, height=6,units="in", dpi=300)
}
答案 0 :(得分:1)
更改代码如下(因为variablename是一个字符串):
promisifyAll
答案 1 :(得分:0)
重新格式化绘图数据,然后在循环中绘制分割数据:
library(tidyr) #gather
# prepare the data, wide to long
plotDat <- gather(datatest, key = "Column", value = "Value", -c(date) )
# then use loop, I prefer lapply
lapply(split(plotDat, plotDat$Column), function(i){
ggplot(i, aes(x = date)) +
geom_histogram(binwidth = 7, fill="#2a87c8", colour="white") +
scale_x_date(limits = c(Sys.Date() - 250, NA), labels = date_format("%b %Y")) +
labs(x = "Period", y = "Count") +
facet_wrap(~ Value , ncol = 1) +
theme(plot.title=element_text(face="bold", size=9),
panel.grid.major = element_line(colour = "white"),
panel.grid.minor = element_blank())
})