我想在格子stripplot
中用两个面板绘制两个不同条件的个别主题方法。我还想添加我已计算并存储在单独数据框中的主体内置信区间。我试图用latticeExtra的layer
函数覆盖这些置信区间。当我添加图层时,两个面板上都显示两组间隔(如下面的代码和第一张图片所示),或者如果我将[subscripts]
添加到x和y中,则两组间隔仅显示在第一个面板上layer
命令(如下面的第二个代码片段和图片所示)。如何在适当的面板上显示相应的间隔?
library(latticeExtra)
raw_data <- data.frame(subject = rep(1:6, 4), cond1 = as.factor(rep(1:2, each = 12)), cond2 = rep(rep(c("A", "B"), each = 6), 2), response = c(2:7, 6:11, 3:8, 7:12))
summary_data <- data.frame(cond1 = as.factor(rep(1:2, each = 2)), cond2 = rep(c("A", "B"), times = 2), mean = aggregate(response ~ cond2 * cond1, raw_data, mean)$response, within_ci = c(0.57, 0.54, 0.6, 0.63))
summary_data$lci <- summary_data$mean - summary_data$within_ci
summary_data$uci <- summary_data$mean + summary_data$within_ci
subject_stripplot <- stripplot(response ~ cond1 | cond2, groups = subject, data = raw_data,
panel = function(x, y, ...) {
panel.stripplot(x, y, type = "b", lty = 2, ...)
panel.average(x, y, fun = mean, lwd = 2, col = "black", ...) # plot line connecting means
}
)
addWithinCI <- layer(panel.segments(x0 = cond1, y0 = lci, x1 = cond1, y1 = uci, subscripts = TRUE), data = summary_data, under = FALSE)
plot(subject_stripplot + addWithinCI)
Stripplot在两个面板上都有两组间隔:
addWithinCI2 <- layer(panel.segments(x0 = cond1[subscripts], y0 = lci[subscripts], x1 = cond1[subscripts], y1 = uci[subscripts], subscripts = TRUE), data = summary_data, under = FALSE)
plot(subject_stripplot + addWithinCI2)
仅在第一个面板上具有两组间隔的Stripplot
答案 0 :(得分:0)
一种可能的解决方案是metastore_db
stripplot(例如,在print
或任何其他图形设备内),然后使用png
修改每个子面板。
trellis.focus
另一个(可能更方便)解决方案是创建单独的## display stripplot
print(subject_stripplot)
## loop over grops
for (i in c("A", "B")) {
# subset of current group
dat <- subset(summary_data, cond2 == i)
# add intervals to current panel
trellis.focus(name = "panel", column = ifelse(i == "A", 1, 2), row = 1)
panel.segments(x0 = dat$cond1, y0 = dat$lci,
x1 = dat$cond1, y1 = dat$uci, subscripts = TRUE)
trellis.unfocus()
}
并设置传递给xyplot
的低y值和高y值(y0
,y1
)手动依赖于当前panel.segments
。与使用panel.number
的初始方法相比,这样创建的绘图可以存储在变量中,因此可用于R中的后续处理。
trellis.focus
答案 1 :(得分:0)
另一种不需要latticeExtra的解决方案(来自Duncan Mackay):
summary_data$cond3 <- sapply(summary_data$cond2, pmatch, LETTERS)
mypanel <- function(x, y, ..., lci, uci, scond1, scond3, groups, type, lty){
pnl = panel.number()
panel.xyplot(x, y, ..., groups = groups, type = type, lty = lty)
panel.average(x, y, horizontal = FALSE, col = "black", lwd = 3)
panel.segments(x0 = scond1[scond3 == pnl],
y0 = lci[scond3 == pnl],
x1 = scond1[scond3 == pnl],
y1 = uci[scond3 == pnl])
}
with(summary_data,
stripplot(response ~ cond1 | cond2, data = raw_data,
groups = subject,
lci = lci,
uci = uci,
scond1 = summary_data$cond1,
scond3 = cond3,
type = "b",
lty = 2,
panel = mypanel)
)