我正在尝试在R中安装Rmpi，安装了intel mpi。首先我下载了Rmpi，并通过以下命令处理：
命令行
R CMD INSTALL --configure-args="--with-mpi=/opt/intel_2015/impi/5.0.1.035/intel64/" Rmpi_0.6-5.tar.gz
但它没有安装，而是显示以下结果：
日志
* installing to library ‘/home/user/R/x86_64-pc-linux-gnu-library/3.2’
* installing *source* package ‘Rmpi’ ...
** package ‘Rmpi’ successfully unpacked and MD5 sums checked
checking for gcc... icc -std=gnu99
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether icc -std=gnu99 accepts -g... yes
checking for icc -std=gnu99 option to accept ISO C89... none needed
Trying to find mpi.h ...
Found in /opt/intel_2015/impi/5.0.1.035/intel64//include
Trying to find libmpi.so or libmpich.a ...
Found libmpi in /opt/intel_2015/impi/5.0.1.035/intel64//lib
checking for openpty in -lutil... yes
checking for main in -lpthread... yes
configure: error: Unknown type of mpi: use --with-Rmpi-type or RMPI_TYPE to specify it
ERROR: configuration failed for package ‘Rmpi’
* removing ‘/home/user/R/x86_64-pc-linux-gnu-library/3.2/Rmpi’
* restoring previous ‘/home/user/R/x86_64-pc-linux-gnu-library/3.2/Rmpi’
然后我使用--with-Rmpi-type='MPI2CH'和--with-Rmpi-type='OPENMPI'没有任何效果，我知道它一定是mpi类型的问题。但我尝试了所有我能找到的东西，仍然无法弄明白。
的架构
以下是我的.bashrc英特尔文件
source /opt/intel_2015/bin/compilervars.sh intel64
source /opt/intel_2015/impi/5.0.1.035/bin64/mpivars.sh
source /opt/intel_2015/composer_xe_2015.0.090/mkl/bin/mklvars.sh intel64
source /opt/intel_2015/bin/iccvars.sh intel64
尝试以下命令后：
R CMD INSTALL --configure-args="\
--with-Rmpi-include='/opt/intel_2015/impi/5.0.1.035/intel64/include' \
--with-Rmpi-libpath='/opt/intel_2015/impi/5.0.1.035/intel64/lib' \
--with-mpi='/opt/intel_2015/impi/5.0.1.035/intel64' \
--with-Rmpi-type='OPENMPI' " Rmpi_0.6-5.tar.gz
它显示了以下结果，但仍有问题，但很有希望：
* installing *source* package ‘Rmpi’ ...
** package ‘Rmpi’ successfully unpacked and MD5 sums checked
checking for openpty in -lutil... no
checking for main in -lpthread... no
configure: creating ./config.status
config.status: creating src/Makevars
** libs
icc -std=gnu99 -I/opt/R-3.2.3MKL/lib64/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/opt/intel_2015/impi/5.0.1.035/intel64/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -ip -O3 -opt-mem-layout-trans=3 -xHost -march=core-avx2 -wd188 -fp-model precise -c Rmpi.c -o Rmpi.o
icc -std=gnu99 -I/opt/R-3.2.3MKL/lib64/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/opt/intel_2015/impi/5.0.1.035/intel64/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -ip -O3 -opt-mem-layout-trans=3 -xHost -march=core-avx2 -wd188 -fp-model precise -c conversion.c -o conversion.o
icc -std=gnu99 -I/opt/R-3.2.3MKL/lib64/R/include -DNDEBUG -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DPACKAGE_URL=\"\" -I/opt/intel_2015/impi/5.0.1.035/intel64/include -DMPI2 -DOPENMPI -I/usr/local/include -fpic -ip -O3 -opt-mem-layout-trans=3 -xHost -march=core-avx2 -wd188 -fp-model precise -c internal.c -o internal.o
icc -std=gnu99 -shared -L/usr/local/lib64 -o Rmpi.so Rmpi.o conversion.o internal.o -L/opt/intel_2015/impi/5.0.1.035/intel64/lib -lmpi
installing to /home/user/R/x86_64-pc-linux-gnu-library/3.2/Rmpi/libs
** R
** demo
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded
* DONE (Rmpi)
答案 0 :(得分：0)
请尝试这个：
我发现的是依赖性错误。我的意思是Rmpi如果OpenMPI被编译为动态加载扩展（现在是默认安装），则不起作用。如果您的OpenMPI是＆gt; = 1.x（对于某些安装的1.x.x），您需要从禁用dlopen的来源安装它。
<强>所以：
尝试卸载所有
MPI接口，重新安装OpenMPI使用＆＃34; - enabled-shared --disable-dlopen＆＃34;命令，Rmpi应该可以 在R内成功安装。
R CMD INSTALL Rmpi_0.6-5.tar.gz --configure-args="--with-mpi=/usr/local/ --with-Rmpi-type=OPENMPI --enabled-shared --disable-dlopen"
我希望它适合你。但不要放弃:)）