如何在tensorflow中将jpeg图像的目录转换为TFRecords文件?

时间:2015-11-21 22:57:47

标签: tensorflow

我有训练数据,这是jpeg图像的目录和包含文件名和相关类别标签的相应文本文件。我正在尝试将此训练数据转换为tfrecords文件,如tensorflow文档中所述。我花了很长时间试图让它工作但是tensorflow中没有示例演示如何使用任何读者读取jpeg文件并使用tfrecordwriter将它们添加到tfrecord

7 个答案:

答案 0 :(得分:39)

我希望这会有所帮助:

filename_queue = tf.train.string_input_producer(['/Users/HANEL/Desktop/tf.png']) #  list of files to read

reader = tf.WholeFileReader()
key, value = reader.read(filename_queue)

my_img = tf.image.decode_png(value) # use decode_png or decode_jpeg decoder based on your files.

init_op = tf.initialize_all_variables()
with tf.Session() as sess:
  sess.run(init_op)

# Start populating the filename queue.

coord = tf.train.Coordinator()
threads = tf.train.start_queue_runners(coord=coord)

for i in range(1): #length of your filename list
  image = my_img.eval() #here is your image Tensor :) 

print(image.shape)
Image.show(Image.fromarray(np.asarray(image)))

coord.request_stop()
coord.join(threads)

要将所有图像作为张量数组获取,请使用以下代码示例。

Github repo of ImageFlow

更新

在上一个回答中,我刚刚讲述了如何以TF格式读取图像,但未将其保存在TFRecords中。为此你应该使用:

def _int64_feature(value):
  return tf.train.Feature(int64_list=tf.train.Int64List(value=[value]))


def _bytes_feature(value):
  return tf.train.Feature(bytes_list=tf.train.BytesList(value=[value]))

# images and labels array as input
def convert_to(images, labels, name):
  num_examples = labels.shape[0]
  if images.shape[0] != num_examples:
    raise ValueError("Images size %d does not match label size %d." %
                     (images.shape[0], num_examples))
  rows = images.shape[1]
  cols = images.shape[2]
  depth = images.shape[3]

  filename = os.path.join(FLAGS.directory, name + '.tfrecords')
  print('Writing', filename)
  writer = tf.python_io.TFRecordWriter(filename)
  for index in range(num_examples):
    image_raw = images[index].tostring()
    example = tf.train.Example(features=tf.train.Features(feature={
        'height': _int64_feature(rows),
        'width': _int64_feature(cols),
        'depth': _int64_feature(depth),
        'label': _int64_feature(int(labels[index])),
        'image_raw': _bytes_feature(image_raw)}))
    writer.write(example.SerializeToString())

更多信息here

你读了这样的数据:

# Remember to generate a file name queue of you 'train.TFRecord' file path
def read_and_decode(filename_queue):
  reader = tf.TFRecordReader()
  _, serialized_example = reader.read(filename_queue)
  features = tf.parse_single_example(
    serialized_example,
    dense_keys=['image_raw', 'label'],
    # Defaults are not specified since both keys are required.
    dense_types=[tf.string, tf.int64])

  # Convert from a scalar string tensor (whose single string has
  image = tf.decode_raw(features['image_raw'], tf.uint8)

  image = tf.reshape(image, [my_cifar.n_input])
  image.set_shape([my_cifar.n_input])

  # OPTIONAL: Could reshape into a 28x28 image and apply distortions
  # here.  Since we are not applying any distortions in this
  # example, and the next step expects the image to be flattened
  # into a vector, we don't bother.

  # Convert from [0, 255] -> [-0.5, 0.5] floats.
  image = tf.cast(image, tf.float32)
  image = tf.cast(image, tf.float32) * (1. / 255) - 0.5

  # Convert label from a scalar uint8 tensor to an int32 scalar.
  label = tf.cast(features['label'], tf.int32)

  return image, label

答案 1 :(得分:20)

Tensorflow的初始模型有一个文件build_image_data.py可以完成同样的事情,假设每个子目录都代表一个标签。

答案 2 :(得分:3)

我也有同样的问题。

所以这就是我如何获得我自己的jpeg文件的tfrecords文件

编辑:添加sol 1 - 更好的&更快的方式

(推荐)解决方案1:

tensorflow官方github:How to Construct a New Dataset for Retraining ,直接使用官方python脚本build_image_data.pybazel是个更好的主意。

以下是指示:

  

要运行build_image_data.py,您可以运行以下命令行:

# location to where to save the TFRecord data.        
OUTPUT_DIRECTORY=$HOME/my-custom-data/

# build the preprocessing script.
bazel build inception/build_image_data

# convert the data.
bazel-bin/inception/build_image_data \
  --train_directory="${TRAIN_DIR}" \
  --validation_directory="${VALIDATION_DIR}" \
  --output_directory="${OUTPUT_DIRECTORY}" \
  --labels_file="${LABELS_FILE}" \
  --train_shards=128 \
  --validation_shards=24 \
  --num_threads=8
     

其中$OUTPUT_DIRECTORY是分片的位置   TFRecords$LABELS_FILE将是一个由其读取的文本文件   提供所有标签列表的脚本。

然后,它应该做的伎俩。

PS。由Google制作的bazel将代码转换为makefile。

解决方案2:

首先,我引用@capitalistpug的指令并检查shell脚本文件

(由Google提供的shell脚本文件:download_and_preprocess_flowers.sh

其次,我还发现了NVIDIA的一个mini inception-v3培训教程

(NVIDIA官方SPEED UP TRAINING WITH GPU-ACCELERATED TENSORFLOW

小心,需要在Bazel WORKSAPCE环境中执行以下步骤

所以Bazel构建文件可以成功运行

第一步,我注释下载已下载的imagenet数据集的部分

以及我不需要的其余部分download_and_preprocess_flowers.sh

第二步,将目录更改为tensorflow / models / inception

它是Bazel环境,而是Bazel之前构建的

$ cd tensorflow/models/inception 

可选:如果之前未构建,请在cmd中键入以下代码

$ bazel build inception/download_and_preprocess_flowers 

您需要弄清楚下图中的内容

enter image description here

最后一步,输入以下代码:

$ bazel-bin/inception/download_and_preprocess_flowers $Your/own/image/data/path

然后,它将开始调用build_image_data.py并创建tfrecords文件

答案 3 :(得分:2)

请注意,图像将以未压缩的张量形式保存在TFRecord中,可能会将大小增加约5倍。这浪费了存储空间,并且由于需要读取的数据量而导致速度很慢。 / p>

最好只将文件名保存在TFRecord中,然后按需读取文件。新的Dataset API运作良好,the documentation的示例如下:

# Reads an image from a file, decodes it into a dense tensor, and resizes it
# to a fixed shape.
def _parse_function(filename, label):
  image_string = tf.read_file(filename)
  image_decoded = tf.image.decode_jpeg(image_string)
  image_resized = tf.image.resize_images(image_decoded, [28, 28])
  return image_resized, label

# A vector of filenames.
filenames = tf.constant(["/var/data/image1.jpg", "/var/data/image2.jpg", ...])

# `labels[i]` is the label for the image in `filenames[i].
labels = tf.constant([0, 37, ...])

dataset = tf.data.Dataset.from_tensor_slices((filenames, labels))
dataset = dataset.map(_parse_function)

答案 4 :(得分:0)

在Kamil指定的Link中提及代码,以便即使链接断开也可以使用该代码。

"""Converts image data to TFRecords file format with Example protos.

If your data set involves bounding boxes, please look at build_imagenet_data.py.
"""
from __future__ import absolute_import
from __future__ import division
from __future__ import print_function

from datetime import datetime
import os
import random
import sys
import threading

import numpy as np
import tensorflow as tf

tf.app.flags.DEFINE_string('train_directory', '/tmp/',
                           'Training data directory')
tf.app.flags.DEFINE_string('validation_directory', '/tmp/',
                           'Validation data directory')
tf.app.flags.DEFINE_string('output_directory', '/tmp/',
                           'Output data directory')

tf.app.flags.DEFINE_integer('train_shards', 2,
                            'Number of shards in training TFRecord files.')
tf.app.flags.DEFINE_integer('validation_shards', 2,
                            'Number of shards in validation TFRecord files.')

tf.app.flags.DEFINE_integer('num_threads', 2,
                            'Number of threads to preprocess the images.')

# The labels file contains a list of valid labels are held in this file.
# Assumes that the file contains entries as such:
#   dog
#   cat
#   flower
# where each line corresponds to a label. We map each label contained in
# the file to an integer corresponding to the line number starting from 0.
tf.app.flags.DEFINE_string('labels_file', '', 'Labels file')


FLAGS = tf.app.flags.FLAGS


def _int64_feature(value):
  """Wrapper for inserting int64 features into Example proto."""
  if not isinstance(value, list):
    value = [value]
  return tf.train.Feature(int64_list=tf.train.Int64List(value=value))


def _bytes_feature(value):
  """Wrapper for inserting bytes features into Example proto."""
  return tf.train.Feature(bytes_list=tf.train.BytesList(value=[value]))


def _convert_to_example(filename, image_buffer, label, text, height, width):
  """Build an Example proto for an example.
  Args:
    filename: string, path to an image file, e.g., '/path/to/example.JPG'
    image_buffer: string, JPEG encoding of RGB image
    label: integer, identifier for the ground truth for the network
    text: string, unique human-readable, e.g. 'dog'
    height: integer, image height in pixels
    width: integer, image width in pixels
  Returns:
    Example proto
  """

  colorspace = 'RGB'
  channels = 3
  image_format = 'JPEG'

  example = tf.train.Example(features=tf.train.Features(feature={
      'image/height': _int64_feature(height),
      'image/width': _int64_feature(width),
      'image/colorspace': _bytes_feature(tf.compat.as_bytes(colorspace)),
      'image/channels': _int64_feature(channels),
      'image/class/label': _int64_feature(label),
      'image/class/text': _bytes_feature(tf.compat.as_bytes(text)),
      'image/format': _bytes_feature(tf.compat.as_bytes(image_format)),
      'image/filename': _bytes_feature(tf.compat.as_bytes(os.path.basename(filename))),
      'image/encoded': _bytes_feature(tf.compat.as_bytes(image_buffer))}))
  return example


class ImageCoder(object):
  """Helper class that provides TensorFlow image coding utilities."""

  def __init__(self):
    # Create a single Session to run all image coding calls.
    self._sess = tf.Session()

    # Initializes function that converts PNG to JPEG data.
    self._png_data = tf.placeholder(dtype=tf.string)
    image = tf.image.decode_png(self._png_data, channels=3)
    self._png_to_jpeg = tf.image.encode_jpeg(image, format='rgb', quality=100)

    # Initializes function that decodes RGB JPEG data.
    self._decode_jpeg_data = tf.placeholder(dtype=tf.string)
    self._decode_jpeg = tf.image.decode_jpeg(self._decode_jpeg_data, channels=3)

  def png_to_jpeg(self, image_data):
    return self._sess.run(self._png_to_jpeg,
                          feed_dict={self._png_data: image_data})

  def decode_jpeg(self, image_data):
    image = self._sess.run(self._decode_jpeg,
                           feed_dict={self._decode_jpeg_data: image_data})
    assert len(image.shape) == 3
    assert image.shape[2] == 3
    return image


def _is_png(filename):
  """Determine if a file contains a PNG format image.
  Args:
    filename: string, path of the image file.
  Returns:
    boolean indicating if the image is a PNG.
  """
  return '.png' in filename


def _process_image(filename, coder):
  """Process a single image file.
  Args:
    filename: string, path to an image file e.g., '/path/to/example.JPG'.
    coder: instance of ImageCoder to provide TensorFlow image coding utils.
  Returns:
    image_buffer: string, JPEG encoding of RGB image.
    height: integer, image height in pixels.
    width: integer, image width in pixels.
  """
  # Read the image file.
  with tf.gfile.FastGFile(filename, 'rb') as f:
    image_data = f.read()

  # Convert any PNG to JPEG's for consistency.
  if _is_png(filename):
    print('Converting PNG to JPEG for %s' % filename)
    image_data = coder.png_to_jpeg(image_data)

  # Decode the RGB JPEG.
  image = coder.decode_jpeg(image_data)

  # Check that image converted to RGB
  assert len(image.shape) == 3
  height = image.shape[0]
  width = image.shape[1]
  assert image.shape[2] == 3

  return image_data, height, width


def _process_image_files_batch(coder, thread_index, ranges, name, filenames,
                               texts, labels, num_shards):
  """Processes and saves list of images as TFRecord in 1 thread.
  Args:
    coder: instance of ImageCoder to provide TensorFlow image coding utils.
    thread_index: integer, unique batch to run index is within [0, len(ranges)).
    ranges: list of pairs of integers specifying ranges of each batches to
      analyze in parallel.
    name: string, unique identifier specifying the data set
    filenames: list of strings; each string is a path to an image file
    texts: list of strings; each string is human readable, e.g. 'dog'
    labels: list of integer; each integer identifies the ground truth
    num_shards: integer number of shards for this data set.
  """
  # Each thread produces N shards where N = int(num_shards / num_threads).
  # For instance, if num_shards = 128, and the num_threads = 2, then the first
  # thread would produce shards [0, 64).
  num_threads = len(ranges)
  assert not num_shards % num_threads
  num_shards_per_batch = int(num_shards / num_threads)

  shard_ranges = np.linspace(ranges[thread_index][0],
                             ranges[thread_index][1],
                             num_shards_per_batch + 1).astype(int)
  num_files_in_thread = ranges[thread_index][1] - ranges[thread_index][0]

  counter = 0
  for s in range(num_shards_per_batch):
    # Generate a sharded version of the file name, e.g. 'train-00002-of-00010'
    shard = thread_index * num_shards_per_batch + s
    output_filename = '%s-%.5d-of-%.5d' % (name, shard, num_shards)
    output_file = os.path.join(FLAGS.output_directory, output_filename)
    writer = tf.python_io.TFRecordWriter(output_file)

    shard_counter = 0
    files_in_shard = np.arange(shard_ranges[s], shard_ranges[s + 1], dtype=int)
    for i in files_in_shard:
      filename = filenames[i]
      label = labels[i]
      text = texts[i]

      try:
        image_buffer, height, width = _process_image(filename, coder)
      except Exception as e:
        print(e)
        print('SKIPPED: Unexpected eror while decoding %s.' % filename)
        continue

      example = _convert_to_example(filename, image_buffer, label,
                                    text, height, width)
      writer.write(example.SerializeToString())
      shard_counter += 1
      counter += 1

      if not counter % 1000:
        print('%s [thread %d]: Processed %d of %d images in thread batch.' %
              (datetime.now(), thread_index, counter, num_files_in_thread))
        sys.stdout.flush()

    writer.close()
    print('%s [thread %d]: Wrote %d images to %s' %
          (datetime.now(), thread_index, shard_counter, output_file))
    sys.stdout.flush()
    shard_counter = 0
  print('%s [thread %d]: Wrote %d images to %d shards.' %
        (datetime.now(), thread_index, counter, num_files_in_thread))
  sys.stdout.flush()


def _process_image_files(name, filenames, texts, labels, num_shards):
  """Process and save list of images as TFRecord of Example protos.
  Args:
    name: string, unique identifier specifying the data set
    filenames: list of strings; each string is a path to an image file
    texts: list of strings; each string is human readable, e.g. 'dog'
    labels: list of integer; each integer identifies the ground truth
    num_shards: integer number of shards for this data set.
  """
  assert len(filenames) == len(texts)
  assert len(filenames) == len(labels)

  # Break all images into batches with a [ranges[i][0], ranges[i][1]].
  spacing = np.linspace(0, len(filenames), FLAGS.num_threads + 1).astype(np.int)
  ranges = []
  for i in range(len(spacing) - 1):
    ranges.append([spacing[i], spacing[i + 1]])

  # Launch a thread for each batch.
  print('Launching %d threads for spacings: %s' % (FLAGS.num_threads, ranges))
  sys.stdout.flush()

  # Create a mechanism for monitoring when all threads are finished.
  coord = tf.train.Coordinator()

  # Create a generic TensorFlow-based utility for converting all image codings.
  coder = ImageCoder()

  threads = []
  for thread_index in range(len(ranges)):
    args = (coder, thread_index, ranges, name, filenames,
            texts, labels, num_shards)
    t = threading.Thread(target=_process_image_files_batch, args=args)
    t.start()
    threads.append(t)

  # Wait for all the threads to terminate.
  coord.join(threads)
  print('%s: Finished writing all %d images in data set.' %
        (datetime.now(), len(filenames)))
  sys.stdout.flush()


def _find_image_files(data_dir, labels_file):
  """Build a list of all images files and labels in the data set.
  Args:
    data_dir: string, path to the root directory of images.
      Assumes that the image data set resides in JPEG files located in
      the following directory structure.
        data_dir/dog/another-image.JPEG
        data_dir/dog/my-image.jpg
      where 'dog' is the label associated with these images.
    labels_file: string, path to the labels file.
      The list of valid labels are held in this file. Assumes that the file
      contains entries as such:
        dog
        cat
        flower
      where each line corresponds to a label. We map each label contained in
      the file to an integer starting with the integer 0 corresponding to the
      label contained in the first line.
  Returns:
    filenames: list of strings; each string is a path to an image file.
    texts: list of strings; each string is the class, e.g. 'dog'
    labels: list of integer; each integer identifies the ground truth.
  """
  print('Determining list of input files and labels from %s.' % data_dir)
  unique_labels = [l.strip() for l in tf.gfile.FastGFile(
      labels_file, 'r').readlines()]

  labels = []
  filenames = []
  texts = []

  # Leave label index 0 empty as a background class.
  label_index = 1

  # Construct the list of JPEG files and labels.
  for text in unique_labels:
    jpeg_file_path = '%s/%s/*' % (data_dir, text)
    matching_files = tf.gfile.Glob(jpeg_file_path)

    labels.extend([label_index] * len(matching_files))
    texts.extend([text] * len(matching_files))
    filenames.extend(matching_files)

    if not label_index % 100:
      print('Finished finding files in %d of %d classes.' % (
          label_index, len(labels)))
    label_index += 1

  # Shuffle the ordering of all image files in order to guarantee
  # random ordering of the images with respect to label in the
  # saved TFRecord files. Make the randomization repeatable.
  shuffled_index = list(range(len(filenames)))
  random.seed(12345)
  random.shuffle(shuffled_index)

  filenames = [filenames[i] for i in shuffled_index]
  texts = [texts[i] for i in shuffled_index]
  labels = [labels[i] for i in shuffled_index]

  print('Found %d JPEG files across %d labels inside %s.' %
        (len(filenames), len(unique_labels), data_dir))
  return filenames, texts, labels


def _process_dataset(name, directory, num_shards, labels_file):
  """Process a complete data set and save it as a TFRecord.
  Args:
    name: string, unique identifier specifying the data set.
    directory: string, root path to the data set.
    num_shards: integer number of shards for this data set.
    labels_file: string, path to the labels file.
  """
  filenames, texts, labels = _find_image_files(directory, labels_file)
  _process_image_files(name, filenames, texts, labels, num_shards)


def main(unused_argv):
  assert not FLAGS.train_shards % FLAGS.num_threads, (
      'Please make the FLAGS.num_threads commensurate with FLAGS.train_shards')
  assert not FLAGS.validation_shards % FLAGS.num_threads, (
      'Please make the FLAGS.num_threads commensurate with '
      'FLAGS.validation_shards')
  print('Saving results to %s' % FLAGS.output_directory)

  # Run it!
  _process_dataset('validation', FLAGS.validation_directory,
                   FLAGS.validation_shards, FLAGS.labels_file)
  _process_dataset('train', FLAGS.train_directory,
                   FLAGS.train_shards, FLAGS.labels_file)


if __name__ == '__main__':
  tf.app.run()

答案 5 :(得分:0)

如果tfrecord文件的大小太大,则可以直接读取字节。

此链接显示它。 TFrecords occupy more space than original JPEG images

您可以使用此功能直接读取字节。

img_bytes = open(path,'rb').read()

参考

https://github.com/tensorflow/tensorflow/issues/9675

答案 6 :(得分:0)

您可以在此处使用Kubeflow管道进行转换:

https://aihub.cloud.google.com/u/0/p/products%2Fded3e5e5-d2e8-4d65-9b9f-5ffaa9a27ea1

点击下载链接(创建一个Kubeflow集群以运行管道)