尝试在redhat上使用Atlas / OpenBLAS运行R.

时间:2015-09-25 10:24:15

标签: r installation redhat atlas openblas

两天以来,我一直在尝试使用Lapack安装Openblas / atlas并在R中使用它。这让我发疯。我现在已经不能再思考了。

我的服务器使用:
红帽企业Linux服务器版本6.6(圣地亚哥)

以下是我目前安装的内容:

[root@tpdb05 atlas]# yum install atlas.x86_64 blas.x86_64 lapack.x86_64 Loaded plugins: product-id, refresh-packagekit, rhnplugin, security, subscription-manager
    Setting up Install Process
    Package atlas-3.8.4-2.el6.x86_64 already installed and latest version
    Package blas-3.2.1-4.el6.x86_64 already installed and latest version
    Package lapack-3.2.1-4.el6.x86_64 already installed and latest version
[root@tpdb05 ruser]#


yum install lapack.i686
    Installed:
    lapack.i686 0:3.2.1-4.el6

    Dependency Installed:
    blas.i686 0:3.2.1-4.el6                          glibc.i686 0:2.12-1.166.el6_7.3        libgfortran.i686 0:4.4.7-16.el6
    nss-softokn-freebl.i686 0:3.14.3-23.el6_7

    Dependency Updated:
    glibc.x86_64 0:2.12-1.166.el6_7.3         glibc-common.x86_64 0:2.12-1.166.el6_7.3    glibc-devel.x86_64 0:2.12-1.166.el6_7.3
    glibc-headers.x86_64 0:2.12-1.166.el6_7.3 nss-softokn-freebl.x86_64 0:3.14.3-23.el6_7


yum install atlas.i686
    Installed:
        atlas.i686 0:3.8.4-2.el6

[root@tpdb05 SRPMS]# yum install rpm-build
    Installed:
    rpm-build.x86_64 0:4.8.0-47.el6

    Dependency Installed:
    redhat-rpm-config.noarch 0:9.0.3-44.el6

    Dependency Updated:
    rpm.x86_64 0:4.8.0-47.el6             rpm-libs.x86_64 0:4.8.0-47.el6             rpm-python.x86_64 0:4.8.0-47.el6

[root@tpdb05 SRPMS]# yum install atlas-c++-devel.x86_64
    Installed:
      atlas-c++-devel.x86_64 0:0.6.1-1.el5.rf

    Dependency Installed:
      atlas-c++.x86_64 0:0.6.1-1.el5.rf

我尝试了几个没有成功的消息来源:     1 2 3

The R manual mentions the following:

  

指定ATLAS的通常方法是通过
  --with-blas =“ - lf77blas -latlas”

但是我不知道在哪里使用这个命令。安装R?我很确定应该可以简单地在库之间交换..

如何让R使用atlas / openblas / lapack库?

0 个答案:

没有答案