使用ggplot标记/注释极值的最简洁方法是什么?

时间:2012-04-25 06:53:02

标签: r annotations ggplot2

我想使用ggplot2注释所有大于y阈值的y值。

使用基础包plot(lm(y~x))时,自动弹出的第二个图是Residuals vs Fitted,第三个是qqplot,第四个是Scale-location。通过将相应的X值列为相邻注释,每个值都会自动标记您的极端Y值。我正在寻找类似的东西。

使用ggplot2实现此基本默认行为的最佳方法是什么?

1 个答案:

答案 0 :(得分:7)

已更新 scale_size_area()代替scale_area()

您可以从中获取一些东西以满足您的需求。

library(ggplot2)

#Some data
df <- data.frame(x = round(runif(100), 2), y = round(runif(100), 2))

m1 <- lm(y ~ x, data = df)
df.fortified = fortify(m1)

names(df.fortified)   # Names for the variables containing residuals and derived qquantities

# Select extreme values
df.fortified$extreme = ifelse(abs(df.fortified$`.stdresid`) > 1.5, 1, 0)

# Based on examples on page 173 in Wickham's ggplot2 book
plot = ggplot(data = df.fortified, aes(x = x, y = .stdresid)) +
 geom_point() +
 geom_text(data = df.fortified[df.fortified$extreme == 1, ], 
   aes(label = x, x = x, y = .stdresid), size = 3, hjust = -.3)
plot

plot1 = ggplot(data = df.fortified, aes(x = .fitted, y = .resid)) +
   geom_point() + geom_smooth(se = F)

plot2 = ggplot(data = df.fortified, aes(x = .fitted, y = .resid, size = .cooksd)) +
   geom_point() + scale_size_area("Cook's distance") + geom_smooth(se = FALSE, show_guide = FALSE)

library(gridExtra)
grid.arrange(plot1, plot2)

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