Question

我使用conda安装了NanoStat，但是每当我尝试运行它时，都会出现以下错误。我读过多个线程，但似乎无法解决此问题。似乎它试图从不在conda内的目录中调用numpy。如何使其在/hb/groups/bernardi_lab/programs/miniconda3/pkgs/中搜索numpy。

错误：

Traceback (most recent call last):
  File "/opt/ohpc/pub/libs/gnu/numpy/1.12.1/lib64/python2.7/site-packages/numpy/core/__init__.py", line 16, in <module>
    from . import multiarray
ImportError: dynamic module does not define module export function (PyInit_multiarray)

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "/hb/groups/bernardi_lab/programs/miniconda3/envs/nanostat/bin/NanoStat", line 6, in <module>
    from nanostat.NanoStat import main
  File "/hb/groups/bernardi_lab/programs/miniconda3/envs/nanostat/lib/python3.7/site-packages/nanostat/NanoStat.py", line 33, in <module>
    from nanomath import write_stats
  File "/hb/groups/bernardi_lab/programs/miniconda3/envs/nanostat/lib/python3.7/site-packages/nanomath/__init__.py", line 1, in <module>
    from .nanomath import *
  File "/hb/groups/bernardi_lab/programs/miniconda3/envs/nanostat/lib/python3.7/site-packages/nanomath/nanomath.py", line 22, in <module>
    import numpy as np
  File "/opt/ohpc/pub/libs/gnu/numpy/1.12.1/lib64/python2.7/site-packages/numpy/__init__.py", line 142, in <module>
    from . import add_newdocs
  File "/opt/ohpc/pub/libs/gnu/numpy/1.12.1/lib64/python2.7/site-packages/numpy/add_newdocs.py", line 13, in <module>
    from numpy.lib import add_newdoc
  File "/opt/ohpc/pub/libs/gnu/numpy/1.12.1/lib64/python2.7/site-packages/numpy/lib/__init__.py", line 8, in <module>
    from .type_check import *
  File "/opt/ohpc/pub/libs/gnu/numpy/1.12.1/lib64/python2.7/site-packages/numpy/lib/type_check.py", line 11, in <module>
    import numpy.core.numeric as _nx
  File "/opt/ohpc/pub/libs/gnu/numpy/1.12.1/lib64/python2.7/site-packages/numpy/core/__init__.py", line 24, in <module>
    raise ImportError(msg)
ImportError: 
Importing the multiarray numpy extension module failed.  Most
likely you are trying to import a failed build of numpy.
If you're working with a numpy git repo, try `git clean -xdf` (removes all
files not under version control).  Otherwise reinstall numpy.

我尝试卸载并安装nanostat和numpy，但似乎遇到了同样的问题。

当我使用conda list在我的环境中搜索numpy时，它的确显示了python 3.7的numpy。

(nanostat) [rgatins@hummingbird Big_Files]$ conda list | grep numpy
numpy                     1.18.1           py37h4f9e942_0  
numpy-base                1.18.1           py37hde5b4d6_1

但是运行命令时，它似乎正在使用python 2.7捕获不同版本的numpy。

关于如何解决此问题的任何建议？

谢谢！

Nanostat- ImportError：动态模块未定义模块导出功能（PyInit_multiarray）

0 个答案: