在自定义数据集上训练的Spaner NER模型给出了错误的结果

时间:2020-02-18 09:22:40

标签: python nlp spacy named-entity-recognition ner

我已经在自定义数据集中训练了Spacy NER模型。如果我通过'ner'变量的测试数据集,我将获得非常好的准确性。但是,当我保存模型并将测试数据集传递给保存的模型而不是传递给'ner'变量时,我得到的结果很奇怪。 下面是我的代码,其中包括训练模型以及测试准确性。

import json
import random
import logging
from sklearn.metrics import classification_report
from sklearn.metrics import precision_recall_fscore_support
from spacy.gold import GoldParse
from spacy.scorer import Scorer
from sklearn.metrics import accuracy_score
import re
import spacy

def trim_entity_spans(data: list) -> list:
    invalid_span_tokens = re.compile(r'\s')
    cleaned_data = []
    for text, annotations in data:
        entities = annotations['entities']
        valid_entities = []
        for start, end, label in entities:
            valid_start = start
            valid_end = end
            while valid_start < len(text) and invalid_span_tokens.match(
                    text[valid_start]):
                valid_start += 1
            while valid_end > 1 and invalid_span_tokens.match(
                    text[valid_end - 1]):
                valid_end -= 1
            valid_entities.append([valid_start, valid_end, label])
        cleaned_data.append([text, {'entities': valid_entities}])
    return cleaned_data

def convert_dataturks_to_spacy(dataturks_JSON_FilePath):
    try:
        training_data = []
        lines=[]
        with open(dataturks_JSON_FilePath, encoding="utf-8") as f:
            lines = f.readlines()            
        for line in lines:
            data = json.loads(line)
            text = data['content']
            entities = []
            for annotation in data['annotation']:
                point = annotation['points'][0]
                labels = annotation['label']
                if not isinstance(labels, list):
                    labels = [labels]

                for label in labels:
                    entities.append((point['start'], point['end'] + 1 ,label))
            training_data.append((text, {"entities" : entities}))
        return training_data
    except Exception as e:
        logging.exception("Unable to process " + dataturks_JSON_FilePath + "\n" + "error = " + str(e))
        return None

def train_spacy():
    TRAIN_DATA = convert_dataturks_to_spacy("C:\\Users\\akjain\\Downloads\\Entity-Recognition-In-Resumes-SpaCy-master\\traindata.json")
    TRAIN_DATA = trim_entity_spans(TRAIN_DATA)
    nlp = spacy.blank('en')
    if 'ner' not in nlp.pipe_names:
        ner = nlp.create_pipe('ner')
        nlp.add_pipe(ner, last=True)
    for _, annotations in TRAIN_DATA:
         for ent in annotations.get('entities'):
            ner.add_label(ent[2])
    other_pipes = [pipe for pipe in nlp.pipe_names if pipe != 'ner']
    with nlp.disable_pipes(*other_pipes):  # only train NER
        optimizer = nlp.begin_training()
        for itn in range(10):
            print("Statring iteration " + str(itn))
            random.shuffle(TRAIN_DATA)
            losses = {}
            for text, annotations in TRAIN_DATA:
                nlp.update(
                [text],  # batch of texts
                [annotations],  # batch of annotations
                drop=0.2,  # dropout - make it harder to memorise data
                sgd=optimizer,  # callable to update weights
                losses=losses)
            print(losses)    


    nlp.to_disk("C:\\Users\\akjain\\Downloads\\Entity-Recognition-In-Resumes-SpaCy-master\\spacymodel")
    examples = convert_dataturks_to_spacy("C:\\Users\\akjain\\Downloads\\Entity-Recognition-In-Resumes-SpaCy-master\\testdata.json")
    examples = trim_entity_spans(examples)
    tp=0
    tr=0
    tf=0
    ta=0
    c=0        
    for text,annot in examples:
        f=open("resume"+str(c)+".txt","w", encoding ='utf-8')
        nlp_trained = spacy.load('C:\\Users\\akjain\\Downloads\\Entity-Recognition-In-Resumes-SpaCy-master\\spacymodel')
        doc_to_test=nlp_trained(text)
        d={}
        for ent in doc_to_test.ents:
            d[ent.label_]=[]
        for ent in doc_to_test.ents:
            d[ent.label_].append(ent.text)
        for i in set(d.keys()):
            f.write("\n\n")
            f.write(i +":"+"\n")
            for j in set(d[i]):
                f.write(j.replace('\n','')+"\n")
        d={}
        for ent in doc_to_test.ents:
            d[ent.label_]=[0,0,0,0,0,0]
        for ent in doc_to_test.ents:
            doc_gold_text= nlp_trained.make_doc(text)
            gold = GoldParse(doc_gold_text, entities=annot.get("entities"))
            y_true = [ent.label_ if ent.label_ in x else 'Not '+ent.label_ for x in gold.ner]
            y_pred = [x.ent_type_ if x.ent_type_ ==ent.label_ else 'Not '+ent.label_ for x in doc_to_test]  
            if(d[ent.label_][0]==0):
                (p,r,f,s)= precision_recall_fscore_support(y_true,y_pred,average='weighted')
                a=accuracy_score(y_true,y_pred)
                d[ent.label_][0]=1
                d[ent.label_][1]+=p
                d[ent.label_][2]+=r
                d[ent.label_][3]+=f
                d[ent.label_][4]+=a
                d[ent.label_][5]+=1
        c+=1
    for i in d:
        print("\n For Entity "+i+"\n")
        print("Accuracy : "+str((d[i][4]/d[i][5])*100)+"%")
        print("Precision : "+str(d[i][1]/d[i][5]))
        print("Recall : "+str(d[i][2]/d[i][5]))
        print("F-score : "+str(d[i][3]/d[i][5]))
train_spacy()

以某种方式无法正确保存经过训练的模型。我检查了文档(https://spacy.io/usage/saving-loading),但以某种方式无法找出根本原因。我还在堆栈溢出中发现,早期版本的spacy有一些错误,但我使用的是最新版本。

Spacy版本2.2.3

Python版本3.6.5

0 个答案:

没有答案