修复命令行输出

时间:2019-03-23 17:17:09

标签: command-line

Command line showing problems I need help fixing

我当前正在完成布置应用程序的分配,并且试图从输入命令行语句运行程序,但是由于打印了所有这些错误,因此它没有任何输出。此命令行程序是在Java环境中编写的。

C:\Users\Spencer Du\Documents\MSc Computing with placement Cardiff Uni\EMBL-EBI Assignment task\pia-1.3.10>java -cp pia-1.3.10.jar de.mpc.pia.intermediate.compiler.PIACompiler -infile C:\Users\Spencer Du\Documents\MSc Computing with placement Cardiff Uni\EMBL-EBI Assignment task\MSFragger-20190222\MSFragger-20190222\1a-QExHF04026.pepxml -outfile de.mpc.pia.intermediate.compiler.PIACompiler
[23-Mar-2019 18:32:38 - INFO] "file: C:\Users\Spencer
        name: Spencer
        type: null
        additional info file: null" (de.mpc.pia.intermediate.compiler.PIACompiler:1342)
SLF4J: Class path contains multiple SLF4J bindings.
SLF4J: Found binding in [jar:file:/C:/Users/Spencer%20Du/Documents/MSc%20Computing%20with%20placement%20Cardiff%20Uni/EMBL-EBI%20Assignment%20task/pia-1.3.10/lib/logback-classic-1.1.6.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/C:/Users/Spencer%20Du/Documents/MSc%20Computing%20with%20placement%20Cardiff%20Uni/EMBL-EBI%20Assignment%20task/pia-1.3.10/lib/log4j-slf4j-impl-2.5.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: Found binding in [jar:file:/C:/Users/Spencer%20Du/Documents/MSc%20Computing%20with%20placement%20Cardiff%20Uni/EMBL-EBI%20Assignment%20task/pia-1.3.10/lib/slf4j-log4j12-1.6.1.jar!/org/slf4j/impl/StaticLoggerBinder.class]
SLF4J: See http://www.slf4j.org/codes.html#multiple_bindings for an explanation.
18:32:38,377 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback.groovy]
18:32:38,377 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Could NOT find resource [logback-test.xml]
18:32:38,378 |-INFO in ch.qos.logback.classic.LoggerContext[default] - Found resource [logback.xml] at [jar:file:/C:/Users/Spencer%20Du/Documents/MSc%20Computing%20with%20placement%20Cardiff%20Uni/EMBL-EBI%20Assignment%20task/pia-1.3.10/lib/jmztab-modular-model-3.0.8.jar!/logback.xml]
18:32:38,378 |-WARN in ch.qos.logback.classic.LoggerContext[default] - Resource [logback.xml] occurs multiple times on the classpath.
18:32:38,378 |-WARN in ch.qos.logback.classic.LoggerContext[default] - Resource [logback.xml] occurs at [jar:file:/C:/Users/Spencer%20Du/Documents/MSc%20Computing%20with%20placement%20Cardiff%20Uni/EMBL-EBI%20Assignment%20task/pia-1.3.10/lib/jmztab-modular-model-3.0.8.jar!/logback.xml]
18:32:38,378 |-WARN in ch.qos.logback.classic.LoggerContext[default] - Resource [logback.xml] occurs at [jar:file:/C:/Users/Spencer%20Du/Documents/MSc%20Computing%20with%20placement%20Cardiff%20Uni/EMBL-EBI%20Assignment%20task/pia-1.3.10/lib/px-submission-core-2.0.15.jar!/logback.xml]
18:32:38,378 |-WARN in ch.qos.logback.classic.LoggerContext[default] - Resource [logback.xml] occurs at [jar:file:/C:/Users/Spencer%20Du/Documents/MSc%20Computing%20with%20placement%20Cardiff%20Uni/EMBL-EBI%20Assignment%20task/pia-1.3.10/lib/jmztab-modular-util-3.0.8.jar!/logback.xml]
18:32:38,378 |-WARN in ch.qos.logback.classic.LoggerContext[default] - Resource [logback.xml] occurs at [jar:file:/C:/Users/Spencer%20Du/Documents/MSc%20Computing%20with%20placement%20Cardiff%20Uni/EMBL-EBI%20Assignment%20task/pia-1.3.10/lib/jmztab-modular-converters-3.0.8.jar!/logback.xml]
18:32:38,386 |-INFO in ch.qos.logback.core.joran.spi.ConfigurationWatchList@a4102b8 - URL [jar:file:/C:/Users/Spencer%20Du/Documents/MSc%20Computing%20with%20placement%20Cardiff%20Uni/EMBL-EBI%20Assignment%20task/pia-1.3.10/lib/jmztab-modular-model-3.0.8.jar!/logback.xml] is not of type file
18:32:38,438 |-INFO in ch.qos.logback.classic.joran.action.ConfigurationAction - debug attribute not set
18:32:38,441 |-INFO in ch.qos.logback.classic.joran.action.ConfigurationAction - Setting ReconfigureOnChangeFilter scanning period to 30 seconds
18:32:38,441 |-INFO in ReconfigureOnChangeFilter{invocationCounter=0} - Will scan for changes in [[]] every 30 seconds.
18:32:38,441 |-INFO in ch.qos.logback.classic.joran.action.ConfigurationAction - Adding ReconfigureOnChangeFilter as a turbo filter
18:32:38,445 |-INFO in ch.qos.logback.classic.joran.action.LoggerContextListenerAction - Adding LoggerContextListener of type [ch.qos.logback.classic.jul.LevelChangePropagator] to the object stack
18:32:38,463 |-INFO in ch.qos.logback.classic.jul.LevelChangePropagator@11dc3715 - Propagating DEBUG level on Logger[ROOT] onto the JUL framework
18:32:38,463 |-INFO in ch.qos.logback.classic.joran.action.LoggerContextListenerAction - Starting LoggerContextListener
18:32:38,463 |-INFO in ch.qos.logback.core.joran.action.AppenderAction - About to instantiate appender of type [ch.qos.logback.core.ConsoleAppender]
18:32:38,465 |-INFO in ch.qos.logback.core.joran.action.AppenderAction - Naming appender as [console]
18:32:38,469 |-INFO in ch.qos.logback.core.joran.action.NestedComplexPropertyIA - Assuming default type [ch.qos.logback.classic.encoder.PatternLayoutEncoder] for [encoder] property
18:32:38,492 |-INFO in ch.qos.logback.classic.joran.action.LoggerAction - Setting level of logger [uk.ac.ebi.pride.jmztab] to ERROR
18:32:38,492 |-INFO in ch.qos.logback.classic.jul.LevelChangePropagator@11dc3715 - Propagating ERROR level on Logger[uk.ac.ebi.pride.jmztab] onto the JUL framework
18:32:38,492 |-INFO in ch.qos.logback.classic.joran.action.RootLoggerAction - Setting level of ROOT logger to ERROR
18:32:38,492 |-INFO in ch.qos.logback.classic.jul.LevelChangePropagator@11dc3715 - Propagating ERROR level on Logger[ROOT] onto the JUL framework
18:32:38,492 |-INFO in ch.qos.logback.core.joran.action.AppenderRefAction - Attaching appender named [console] to Logger[ROOT]
18:32:38,492 |-INFO in ch.qos.logback.classic.joran.action.ConfigurationAction - End of configuration.
18:32:38,493 |-INFO in ch.qos.logback.classic.joran.JoranConfigurator@69930714 - Registering current configuration as safe fallback point

SLF4J: Actual binding is of type [ch.qos.logback.classic.util.ContextSelectorStaticBinder]
E|JDBCAccess                              |Cannot open the SQLite DB: C:\Users\Spencer via JDBC
E|JDBCAccess                              |SQLite-Error -       SQLState:       0       SQLMessage:     opening db: 'C:\Users\Spencer': Access is denied
E|JDBCAccess                              |JDBC-Error(JDBC): No connection to the database

谢谢 斯潘塞

0 个答案:

没有答案