如何将置信区间作为有色区域添加到ggplot2中的预测值的箱线图中?

时间:2018-08-25 15:07:39

标签: r ggplot2 boxplot confidence-interval

这是我的数据框架,该数据帧具有模型构造后的自举过程的预测概率Pred

require(ggplot2)

Position <- rep(c("B", "A", "Stg", "Str"),3)

Week <- c(rep("1",4), rep("2",4), rep("3",4))

LC <- c(1.09E-02,1.40E-02,1.20E-02,2.86E-02,1.27E-05,1.26E-07,
        5.47E-02,1.34E-01,1.21E-02,8.51E-03,2.27E-02,2.61E-02)

Pred <- c(0.057243157,0.044744656,0.068085039,0.120633045,
          0.002791358,0.005735141,0.230200726,0.38286196,
          0.044698511,0.042201468,0.120200443,0.125982336) 

UC <- c(3.06E-02,3.82E-02,4.05E-02,7.50E-02,2.86E-03,
        1.94E-05,1.59E-01,2.83E-01,2.83E-02,2.91E-02,
        7.35E-02,7.59E-02)

df <- data.frame(Position, Week, LC, Pred, UC)

PositionWeek是因子,其余为数字。 我想在箱形图中的x轴上显示Position,在y轴上显示PredLCUC是置信区间的上限和下限。我的目标是像使用此代码的示例一样,在背景中将限制显示为彩色区域

ggplot(df, aes(x = Week, y = Pred, fill = Position)) +
  geom_ribbon(aes(ymin = LC, ymax = UC, fill = Position), alpha = .15) +
  geom_boxplot(aes(colour = Position), size = 2) +
  ylim(c(0, 0.7))

带有彩色背景的箱线图,用于CI上限和下限:

img1

我尝试过的是

ggplot(df, aes(x = Position, y = Pred, fill = Position)) +  
  geom_ribbon(data=pred,aes(ymin = LC, ymax = UC, fill = Position), 
              alpha = .15) +
  geom_boxplot(aes(colour = Position), size = 2, colour="black") +
  stat_summary(fun.y=mean, geom = "point", size = 1.5) + theme_bw()

但是背景没有颜色。仅用于Pred的箱线图,没有任何背景色:

img2

我将不胜感激!

0 个答案:

没有答案