我有两个数据框要合并。当我用相同的输入数据和代码运行程序时,会出现两种情况(第一个:成功合并;第二个:合并数据中的数据属于“ annotate”,即NaN。)
raw_df2 = pd.merge(annotate,raw_df,on='gene',how='right').fillna("unkown")
然后我要进行测试:
count = 10001
while (count > 10000):
raw_df2 = pd.merge(annotate,raw_df,on='gene',how='right').fillna("unkown")
count = len(raw_df2[raw_df2["type"]=="unkown"])
print(count)
如果合并失败,则“ raw_df”在运行期间总是失败。我必须重新提交脚本,结果可能是成功的。
[前两列来自“ annotate”;其他列来自“ from raw_df”]
失败的结果:
| type | gene | locus | sample_1 | sample_2 | status | value_1 | value_2 |
+--------+---------------+--------------------------+----------+----------+--------+---------+----------+
| unknow | 0610040J01Rik | chr5:63812494-63899619 | Ctrl | SPION10 | OK | 2.02125 | 0.652688 |
| unknow | 1110008F13Rik | chr2:156863121-156887078 | Ctrl | SPION10 | OK | 87.7115 | 49.8795 |
+--------+---------------+--------------------------+----------+----------+--------+---------+----------+
成功的结果:
+--------+----------+------------------------+----------+----------+--------+----------+---------+
| gene | type | locus | sample_1 | sample_2 | status | value_1 | value_2 |
+--------+----------+------------------------+----------+----------+--------+----------+---------+
| St18 | misc_RNA | chr1:6487230-6860940 | Ctrl | SPION10 | OK | 1.90988 | 3.91643 |
| Arid5a | misc_RNA | chr1:36307732-36324029 | Ctrl | SPION10 | OK | 1.33796 | 2.21057 |
| Carf | misc_RNA | chr1:60076867-60153953 | Ctrl | SPION10 | OK | 0.846988 | 1.47619 |
+--------+----------+------------------------+----------+----------+--------+----------+---------+