调用z:org.apache.spark.api.python.PythonRDD.collectAndServe时发生错误

时间:2018-07-26 18:57:17

标签: apache-spark

我有一些通常可以正常运行的代码,但是当我使用较大的输入/输出文件运行它时会崩溃。这是我得到的错误。我尝试更改以下spark参数,但在相似的时间仍然失败。知道如何调试吗?另外,如何增加失败尝试的次数?我不知道哪个“火花”参数控制“最大允许次数失败”的重试次数。

'spark.shuffle.registration.maxAttempts': 30,
'spark.shuffle.registration.timeout': 50000,
'spark.reducer.maxSizeInFlight': '256m',
'spark.shuffle.file.buffer': '256k',
'spark.shuffle.service.index.cache.size': '1000m',
'spark.shuffle.io.maxRetries': 30,
'spark.shuffle.io.retryWait': '10s',
'spark.network.timeout': '600s',
'spark.rpc.numRetries': 30,

错误:

py4j.protocol.Py4JJavaError: An error occurred while calling z:org.apache.spark.api.python.PythonRDD.collectAndServe.
: org.apache.spark.SparkException: Job aborted due to stage failure: ResultStage 1 (collect at /storage/home/spark_procedures.py:400) has failed the maximum allowable number of times: 4. Most recent failure reason: org.apache.spark.shuffle.FetchFailedException: java.util.concurrent.TimeoutException: Timeout waiting for task.       at org.apache.spark.storage.ShuffleBlockFetcherIterator.throwFetchFailedException(ShuffleBlockFetcherIterator.scala:513)        at org.apache.spark.storage.ShuffleBlockFetcherIterator.next(ShuffleBlockFetcherIterator.scala:444)     at org.apache.spark.storage.ShuffleBlockFetcherIterator.next(ShuffleBlockFetcherIterator.scala:61)      at scala.collection.Iterator$$anon$12.nextCur(Iterator.scala:434)       at scala.collection.Iterator$$anon$12.hasNext(Iterator.scala:440)       at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:408)       at org.apache.spark.util.CompletionIterator.hasNext(CompletionIterator.scala:32)        at org.apache.spark.InterruptibleIterator.hasNext(InterruptibleIterator.scala:37)       at scala.collection.Iterator$$anon$11.hasNext(Iterator.scala:408)       at scala.collection.Iterator$class.foreach(Iterator.scala:893)  at scala.collection.AbstractIterator.foreach(Iterator.scala:1336)       at org.apache.spark.api.python.PythonRDD$.writeIteratorToStream(PythonRDD.scala:518)    at org.apache.spark.api.python.PythonRunner$WriterThread$$anonfun$run$3.apply(PythonRDD.scala:333)      at org.apache.spark.util.Utils$.logUncaughtExceptions(Utils.scala:1948)         at org.apache.spark.api.python.PythonRunner$WriterThread.run(PythonRDD.scala:269) Caused by: java.lang.RuntimeException: java.util.concurrent.TimeoutException: Timeout waiting for task.       at org.spark_project.guava.base.Throwables.propagate(Throwables.java:160)       at org.apache.spark.network.client.TransportClient.sendRpcSync(TransportClient.java:275)        at org.apache.spark.network.sasl.SaslClientBootstrap.doBootstrap(SaslClientBootstrap.java:70)   at org.apache.spark.network.crypto.AuthClientBootstrap.doSaslAuth(AuthClientBootstrap.java:115)         at org.apache.spark.network.crypto.AuthClientBootstrap.doBootstrap(AuthClientBootstrap.java:74)         at org.apache.spark.network.client.TransportClientFactory.createClient(TransportClientFactory.java:244)         at org.apache.spark.network.client.TransportClientFactory.createClient(TransportClientFactory.java:182)         at org.apache.spark.network.netty.NettyBlockTransferService$$anon$1.createAndStart(NettyBlockTransferService.scala:97)  at org.apache.spark.network.shuffle.RetryingBlockFetcher.fetchAllOutstanding(RetryingBlockFetcher.java:141)     at org.apache.spark.network.shuffle.RetryingBlockFetcher.start(RetryingBlockFetcher.java:121)   at org.apache.spark.network.netty.NettyBlockTransferService.fetchBlocks(NettyBlockTransferService.scala:107)    at org.apache.spark.storage.ShuffleBlockFetcherIterator.sendRequest(ShuffleBlockFetcherIterator.scala:250)      at org.apache.spark.storage.ShuffleBlockFetcherIterator.org$apache$spark$storage$ShuffleBlockFetcherIterator$$send$1(ShuffleBlockFetcherIterator.scala:490)     at org.apache.spark.storage.ShuffleBlockFetcherIterator.fetchUpToMaxBytes(ShuffleBlockFetcherIterator.scala:485)        at org.apache.spark.storage.ShuffleBlockFetcherIterator.initialize(ShuffleBlockFetcherIterator.scala:348)       at org.apache.spark.storage.ShuffleBlockFetcherIterator.<init>(ShuffleBlockFetcherIterator.scala:153)   at org.apache.spark.shuffle.BlockStoreShuffleReader.read(BlockStoreShuffleReader.scala:45)      at org.apache.spark.rdd.ShuffledRDD.compute(ShuffledRDD.scala:105)      at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)      at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)     at org.apache.spark.rdd.MapPartitionsRDD.compute(MapPartitionsRDD.scala:38)     at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)      at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)     at org.apache.spark.api.python.PythonRDD.compute(PythonRDD.scala:63)    at org.apache.spark.rdd.RDD.computeOrReadCheckpoint(RDD.scala:323)      at org.apache.spark.rdd.RDD.iterator(RDD.scala:287)     at org.apache.spark.scheduler.ResultTask.runTask(ResultTask.scala:87)   at org.apache.spark.scheduler.Task.run(Task.scala:108)  at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:338)        at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)      at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)      at java.lang.Thread.run(Thread.java:748) Caused by: java.util.concurrent.TimeoutException: Timeout waiting for task.    at org.spark_project.guava.util.concurrent.AbstractFuture$Sync.get(AbstractFuture.java:276)     at org.spark_project.guava.util.concurrent.AbstractFuture.get(AbstractFuture.java:96)   at org.apache.spark.network.client.TransportClient.sendRpcSync(TransportClient.java:271)        ... 30 more 
        at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1517)
        at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1505)
        at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1504)
        at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
        at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:48)
        at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1504)
        at org.apache.spark.scheduler.DAGScheduler.handleTaskCompletion(DAGScheduler.scala:1329)
        at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1729)
        at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1687)
        at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1676)
        at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
        at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:630)
        at org.apache.spark.SparkContext.runJob(SparkContext.scala:2029)
        at org.apache.spark.SparkContext.runJob(SparkContext.scala:2050)
        at org.apache.spark.SparkContext.runJob(SparkContext.scala:2069)
        at org.apache.spark.SparkContext.runJob(SparkContext.scala:2094)
        at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:936)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:151)
        at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:112)
        at org.apache.spark.rdd.RDD.withScope(RDD.scala:362)
        at org.apache.spark.rdd.RDD.collect(RDD.scala:935)
        at org.apache.spark.api.python.PythonRDD$.collectAndServe(PythonRDD.scala:467)
        at org.apache.spark.api.python.PythonRDD.collectAndServe(PythonRDD.scala)
        at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
        at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:62)
        at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.lang.reflect.Method.invoke(Method.java:498)
        at py4j.reflection.MethodInvoker.invoke(MethodInvoker.java:244)
        at py4j.reflection.ReflectionEngine.invoke(ReflectionEngine.java:357)
        at py4j.Gateway.invoke(Gateway.java:280)
        at py4j.commands.AbstractCommand.invokeMethod(AbstractCommand.java:132)
        at py4j.commands.CallCommand.execute(CallCommand.java:79)
        at py4j.GatewayConnection.run(GatewayConnection.java:214)
        at java.lang.Thread.run(Thread.java:748)

0 个答案:

没有答案