我无法弄清楚给定代码中的问题：
我正在使用dask合并多个数据帧。合并后，我想从列中找到其中一个唯一值。我在使用unique().compute()从dask转换为pandas时遇到类型错误。但是，我似乎无法找到究竟是什么问题。它表示str不能被指定为int，但是在代码传递的某些文件中，而在某些文件中则没有。我也找不到数据结构的问题。
有什么建议吗？
import pandas as pd
import dask.dataframe as dd
# Everything is fine until merging
# I have put several print(markers) to find the problem code
print('dask cols')
print(df_by_dask_merged.columns)
print()
print(dask_cols)
print()
print('find unique contigs values in dask dataframe')
pd_df = df_by_dask_merged['contig']
print(pd_df)
print()
print('mark 02')
# this is the problem code ??
pd_df_contig = pd_df.unique().compute()
print(pd_df_contig)
print('mark 03')
终端输出：
dask cols
Index(['contig', 'pos', 'ref', 'all-alleles', 'ms01e_PI', 'ms01e_PG_al',
'ms02g_PI', 'ms02g_PG_al', 'all-freq'],
dtype='object')
['contig', 'pos', 'ref', 'all-alleles', 'ms01e_PI', 'ms01e_PG_al', 'ms02g_PI', 'ms02g_PG_al', 'all-freq']
find unique contigs values in dask dataframe
Dask Series Structure:
npartitions=1
int64
...
Name: contig, dtype: int64
Dask Name: getitem, 52 tasks
mark 02
Traceback (most recent call last):
File "/home/everestial007/.local/lib/python3.5/site-packages/pandas/indexes/base.py", line 2145, in get_value
return tslib.get_value_box(s, key)
File "pandas/tslib.pyx", line 880, in pandas.tslib.get_value_box (pandas/tslib.c:17368)
File "pandas/tslib.pyx", line 889, in pandas.tslib.get_value_box (pandas/tslib.c:17042)
TypeError: 'str' object cannot be interpreted as an integer
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "merge_haplotype.py", line 305, in <module>
main()
File "merge_haplotype.py", line 152, in main
pd_df_contig = pd_df.unique().compute()
File "/home/everestial007/anaconda3/lib/python3.5/site-packages/dask/base.py", line 155, in compute
(result,) = compute(self, traverse=False, **kwargs)
File "/home/everestial007/anaconda3/lib/python3.5/site-packages/dask/base.py", line 404, in compute
results = get(dsk, keys, **kwargs)
File "/home/everestial007/anaconda3/lib/python3.5/site-packages/dask/threaded.py", line 75, in get
pack_exception=pack_exception, **kwargs)
File "/home/everestial007/anaconda3/lib/python3.5/site-packages/dask/local.py", line 521, in get_async
raise_exception(exc, tb)
File "/home/everestial007/anaconda3/lib/python3.5/site-packages/dask/compatibility.py", line 67, in reraise
raise exc
File "/home/everestial007/anaconda3/lib/python3.5/site-packages/dask/local.py", line 290, in execute_task
result = _execute_task(task, data)
File "/home/everestial007/anaconda3/lib/python3.5/site-packages/dask/local.py", line 271, in _execute_task
return func(*args2)
File "/home/everestial007/anaconda3/lib/python3.5/site-packages/dask/dataframe/core.py", line 3404, in apply_and_enforce
df = func(*args, **kwargs)
File "/home/everestial007/anaconda3/lib/python3.5/site-packages/dask/utils.py", line 687, in __call__
return getattr(obj, self.method)(*args, **kwargs)
File "/home/everestial007/.local/lib/python3.5/site-packages/pandas/core/frame.py", line 4133, in apply
return self._apply_standard(f, axis, reduce=reduce)
File "/home/everestial007/.local/lib/python3.5/site-packages/pandas/core/frame.py", line 4229, in _apply_standard
results[i] = func(v)
File "merge_haplotype.py", line 249, in <lambda>
apply(lambda row : update_cols(row, sample_name), axis=1, meta=(int))
File "merge_haplotype.py", line 278, in update_cols
if 'N|N' in df_by_dask[sample_name + '_PG_al']:
File "/home/everestial007/.local/lib/python3.5/site-packages/pandas/core/series.py", line 601, in __getitem__
result = self.index.get_value(self, key)
File "/home/everestial007/.local/lib/python3.5/site-packages/pandas/indexes/base.py", line 2153, in get_value
raise e1
File "/home/everestial007/.local/lib/python3.5/site-packages/pandas/indexes/base.py", line 2139, in get_value
tz=getattr(series.dtype, 'tz', None))
File "pandas/index.pyx", line 105, in pandas.index.IndexEngine.get_value (pandas/index.c:3338)
File "pandas/index.pyx", line 113, in pandas.index.IndexEngine.get_value (pandas/index.c:3041)
File "pandas/index.pyx", line 161, in pandas.index.IndexEngine.get_loc (pandas/index.c:4024)
File "pandas/src/hashtable_class_helper.pxi", line 732, in pandas.hashtable.PyObjectHashTable.get_item (pandas/hashtable.c:13161)
File "pandas/src/hashtable_class_helper.pxi", line 740, in pandas.hashtable.PyObjectHashTable.get_item (pandas/hashtable.c:13115)
KeyError: ('ms02g_PG_al', 'occurred at index 0')