Question

我在Mac上运行R版本3.5。当我尝试通过

安装OpenMx时

install.packages("OpenMx")

最终在一堆警告信息后失败。

首先警告信息是

xcrun: error: invalid active developer path (/Library/Developer/CommandLineTools), missing xcrun at: /Library/Developer/CommandLineTools/usr/bin/xcrun

并发现这可以通过运行

来处理

xcode-select --install

终端上的

。

我在安装xcode后尝试安装OpenMx时，

最后几行消息是：

optimize.c:35:15: warning: unused function 'f_bound' [-Wunused-function]
static double f_bound(int n, const double *x, void *data_)
              ^
optimize.c:51:15: warning: unused function 'f_noderiv' [-Wunused-function]
static double f_noderiv(int n, const double *x, void *data_)
              ^
optimize.c:57:15: warning: unused function 'f_direct' [-Wunused-function]
static double f_direct(int n, const double *x, int *undefined, void *data_)
              ^
optimize.c:79:21: warning: unused function 'initial_step' [-Wunused-function]
static nlopt_result initial_step(nlopt_opt opt, const double *x, double *step)
                    ^
optimize.c:101:12: warning: unused function 'finite_domain' [-Wunused-function]
static int finite_domain(unsigned n, const double *lb, const double *ub)
           ^
5 warnings generated.
clang -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/Rcpp/include" -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/RcppEigen/include" -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/StanHeaders/include" -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/BH/include" -I"/Library/Frameworks/R.framework/Versions/3.5/Resources/library/rpf/include" -I/usr/local/include   -fPIC  -Wall -g -O2  -c options.c -o options.o
gfortran   -fPIC  -g -O2  -c sadmvn.f -o sadmvn.o
make: gfortran: No such file or directory
make: *** [sadmvn.o] Error 1
ERROR: compilation failed for package ‘OpenMx’
* removing ‘/Library/Frameworks/R.framework/Versions/3.5/Resources/library/OpenMx’
Warning in install.packages :
  installation of package ‘OpenMx’ had non-zero exit status

The downloaded source packages are in
‘/private/var/folders/f8/y98w5w9n3yz3sq2pthhw35xm0000gn/T/RtmpJtQ01E/downloaded_packages’

有没有办法解决这个问题？

Answer 1

这是关键错误消息：

make：gfortran：没有这样的文件或目录

您需要安装gfortran编译器。您可以在此处找到编译器和下载/安装说明：https://gcc.gnu.org/wiki/GFortranBinaries。

（注意：此解决方案也是为响应不同的R包here而提供的。）

Answer 2

install.packages（＆＃34; OpenMx＆＃34;）应适用于R 3.5下的所有平台在CRAN完成为所有平台推出新的二进制构建之前，您可能已经尝试过。 Jut现在再试一次。

如果您想从源代码构建（不必要），则需要为R＆gt; = 3.4安装at CRAN安装整个MacOS工具链。

无法在R中安装OpenMx包

2 个答案: