我现在正试图在超级计算机上运行程序,我无法运行sudo或easy_install。该程序需要pandas所以我需要pip安装pandas但我仍然收到此错误消息,即使我已经尝试过" pip install --upgrade pip"已经
您使用的是pip版本8.1.2,但版本9.0.1可用。 您应该考虑通过“pip install --upgrade pip”进行升级。命令。
- edit-- 这是我pip3安装pandas时的错误消息。
pip3 install pandas
Collecting pandas
Using cached pandas-0.22.0.tar.gz
Complete output from command python setup.py egg_info:
Running from numpy source directory.
/tmp/easy_install-gv5il123/numpy-1.14.1/setup.py:369: UserWarning: Unrecognized setuptools command, proceeding with generating Cython sources and expanding templates
run_build = parse_setuppy_commands()
/usr/lib64/python3.4/distutils/dist.py:260: UserWarning: Unknown distribution option: 'python_requires'
warnings.warn(msg)
/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/system_info.py:624: UserWarning:
Atlas (http://math-atlas.sourceforge.net/) libraries not found.
Directories to search for the libraries can be specified in the
numpy/distutils/site.cfg file (section [atlas]) or by setting
the ATLAS environment variable.
self.calc_info()
/usr/lib64/python3.4/distutils/dist.py:260: UserWarning: Unknown distribution option: 'python_requires'
warnings.warn(msg)
/usr/lib64/python3.4/distutils/dist.py:260: UserWarning: Unknown distribution option: 'define_macros'
warnings.warn(msg)
Traceback (most recent call last):
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 154, in save_modules
yield saved
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 239, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 269, in run
return func()
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 238, in runner
_execfile(setup_script, ns)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 46, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-gv5il123/numpy-1.14.1/setup.py", line 394, in <module>
File "/tmp/easy_install-gv5il123/numpy-1.14.1/setup.py", line 386, in setup_package
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/core.py", line 169, in setup
File "/usr/lib64/python3.4/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib64/python3.4/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/lib/python3.4/site-packages/setuptools/command/bdist_egg.py", line 151, in run
self.run_command("egg_info")
File "/usr/lib64/python3.4/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/egg_info.py", line 26, in run
File "/usr/lib64/python3.4/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 148, in run
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 165, in build_sources
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 324, in build_extension_sources
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 377, in generate_sources
File "numpy/core/setup.py", line 422, in generate_config_h
return tag
File "numpy/core/setup.py", line 48, in check_types
min_numpy_ver = '1.9.0'
File "numpy/core/setup.py", line 281, in check_types
pjoin(ujson_lib,'ultrajsondec.c'),
SystemError: Cannot compile 'Python.h'. Perhaps you need to install python-dev|python-devel.
During handling of the above exception, another exception occurred:
Traceback (most recent call last):
File "<string>", line 1, in <module>
File "/tmp/pip-build-xqyfs1o1/pandas/setup.py", line 743, in <module>
**setuptools_kwargs)
File "/usr/lib64/python3.4/distutils/core.py", line 108, in setup
_setup_distribution = dist = klass(attrs)
File "/usr/lib/python3.4/site-packages/setuptools/dist.py", line 268, in __init__
self.fetch_build_eggs(attrs['setup_requires'])
File "/usr/lib/python3.4/site-packages/setuptools/dist.py", line 312, in fetch_build_eggs
replace_conflicting=True,
File "/usr/lib/python3.4/site-packages/pkg_resources/__init__.py", line 846, in resolve
dist = best[req.key] = env.best_match(req, ws, installer)
File "/usr/lib/python3.4/site-packages/pkg_resources/__init__.py", line 1091, in best_match
return self.obtain(req, installer)
File "/usr/lib/python3.4/site-packages/pkg_resources/__init__.py", line 1103, in obtain
return installer(requirement)
File "/usr/lib/python3.4/site-packages/setuptools/dist.py", line 379, in fetch_build_egg
return cmd.easy_install(req)
File "/usr/lib/python3.4/site-packages/setuptools/command/easy_install.py", line 638, in easy_install
return self.install_item(spec, dist.location, tmpdir, deps)
File "/usr/lib/python3.4/site-packages/setuptools/command/easy_install.py", line 668, in install_item
dists = self.install_eggs(spec, download, tmpdir)
File "/usr/lib/python3.4/site-packages/setuptools/command/easy_install.py", line 851, in install_eggs
return self.build_and_install(setup_script, setup_base)
File "/usr/lib/python3.4/site-packages/setuptools/command/easy_install.py", line 1079, in build_and_install
self.run_setup(setup_script, setup_base, args)
File "/usr/lib/python3.4/site-packages/setuptools/command/easy_install.py", line 1065, in run_setup
run_setup(setup_script, args)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 242, in run_setup
raise
File "/usr/lib64/python3.4/contextlib.py", line 77, in __exit__
self.gen.throw(type, value, traceback)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/usr/lib64/python3.4/contextlib.py", line 77, in __exit__
self.gen.throw(type, value, traceback)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 166, in save_modules
saved_exc.resume()
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 141, in resume
compat.reraise(type, exc, self._tb)
File "/usr/lib/python3.4/site-packages/setuptools/compat.py", line 69, in reraise
raise value.with_traceback(tb)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 154, in save_modules
yield saved
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 195, in setup_context
yield
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 239, in run_setup
DirectorySandbox(setup_dir).run(runner)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 269, in run
return func()
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 238, in runner
_execfile(setup_script, ns)
File "/usr/lib/python3.4/site-packages/setuptools/sandbox.py", line 46, in _execfile
exec(code, globals, locals)
File "/tmp/easy_install-gv5il123/numpy-1.14.1/setup.py", line 394, in <module>
File "/tmp/easy_install-gv5il123/numpy-1.14.1/setup.py", line 386, in setup_package
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/core.py", line 169, in setup
File "/usr/lib64/python3.4/distutils/core.py", line 148, in setup
dist.run_commands()
File "/usr/lib64/python3.4/distutils/dist.py", line 955, in run_commands
self.run_command(cmd)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/usr/lib/python3.4/site-packages/setuptools/command/bdist_egg.py", line 151, in run
self.run_command("egg_info")
File "/usr/lib64/python3.4/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/egg_info.py", line 26, in run
File "/usr/lib64/python3.4/distutils/cmd.py", line 313, in run_command
self.distribution.run_command(command)
File "/usr/lib64/python3.4/distutils/dist.py", line 974, in run_command
cmd_obj.run()
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 148, in run
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 165, in build_sources
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 324, in build_extension_sources
File "/tmp/easy_install-gv5il123/numpy-1.14.1/numpy/distutils/command/build_src.py", line 377, in generate_sources
File "numpy/core/setup.py", line 422, in generate_config_h
return tag
File "numpy/core/setup.py", line 48, in check_types
min_numpy_ver = '1.9.0'
File "numpy/core/setup.py", line 281, in check_types
pjoin(ujson_lib,'ultrajsondec.c'),
SystemError: Cannot compile 'Python.h'. Perhaps you need to install python-dev|python-devel.
/tmp/easy_install-gv5il123/numpy-1.14.1/temp/tmpsx06jzi5/source.c:1:19: fatal error: cblas.h: No such file or directory
#include <cblas.h>
^
compilation terminated.
/tmp/easy_install-gv5il123/numpy-1.14.1/temp/tmpsx06jzi5/source.c:1:19: fatal error: cblas.h: No such file or directory
#include <cblas.h>
^
compilation terminated.
non-existing path in 'numpy/distutils': 'site.cfg'
_configtest.c:1:5: warning: conflicting types for built-in function ‘exp’
int exp (void);
^~~
_configtest.o: In function `main':
/tmp/easy_install-gv5il123/numpy-1.14.1/_configtest.c:6: undefined reference to `exp'
collect2: error: ld returned 1 exit status
_configtest.o: In function `main':
/tmp/easy_install-gv5il123/numpy-1.14.1/_configtest.c:6: undefined reference to `exp'
collect2: error: ld returned 1 exit status
_configtest.c:1:5: warning: conflicting types for built-in function ‘exp’
int exp (void);
^~~
_configtest.c:1:20: fatal error: Python.h: No such file or directory
#include <Python.h>
^
compilation terminated.
_configtest.c:1:20: fatal error: Python.h: No such file or directory
#include <Python.h>
^
compilation terminated.
----------------------------------------
Command "python setup.py egg_info" failed with error code 1 in
/tmp/pip-build-xqyfs1o1/pandas/
You are using pip version 8.1.2, however version 9.0.1 is available.
You should consider upgrading via the 'pip install --upgrade pip' command.
答案 0 :(得分:2)
您错过了包python-dev
和python-devel
。
但由于您不是该服务器上的root用户,因此您可能无法自行安装它们。基本上你可以问管理员他是否可以为你安装它们。
我建议安装本地版本的Python并在那里安装软件包。
顺便说一下:因为你不是root pip
所以会失败,因为你可能没有权利全局安装包。您应该使用pip install <package> --user
代替。