对比度出现错误,似乎无法解决

时间:2018-02-12 14:47:59

标签: r regression lm linear

我有两个数据帧我正在进行相同的分析。在将三个新变量引入数据帧的.csv(s)之后,我在两个集合中的一个上遇到了重复出错。虽然网上有很多关于错误的参考,但我似乎找不到任何解决了我的具体案例的事情。

修改

我应该补充一下,我可以发布数据样本,但为了保护隐私和上传,样本将经过严格审查。

> # import datasets
...
> 
> # set options
> options(max.print = .Machine$integer.max)
> 
> # (attempt to) delete conflict data
> ImmatureTree_Data$SPE_TYP <- NULL
> MatureTree_Data$SPE_TYP <- NULL
> ImmatureTree_Data <- ImmatureTree_Data[ImmatureTree_Data$SPECIES_CO %in% names(which(table(ImmatureTree_Data$SPECIES_CO) > 9)), ]
> MatureTree_Data <- MatureTree_Data[MatureTree_Data$SPECIES_CO %in% names(which(table(MatureTree_Data$SPECIES_CO) > 9)), ]
> 
> # remove dead trees
> MatureTree_Data <- subset(MatureTree_Data, TREE_STATU != 1)
> MatureTree_Data <- subset(MatureTree_Data, TREE_STATU != 2)
> MatureTree_Data <- subset(MatureTree_Data, TREE_STATU != 5)
> ImmatureTree_Data <- subset(ImmatureTree_Data, TREE_STATU != 1)
> ImmatureTree_Data <- subset(ImmatureTree_Data, TREE_STATU != 2)
> ImmatureTree_Data <- subset(ImmatureTree_Data, TREE_STATU != 5)
> 
> # divide GDD and PCP by 1000
> MatureTree_Data$GDD <- MatureTree_Data$GDD/1000
> MatureTree_Data$PCP <- MatureTree_Data$PCP/1000
> ImmatureTree_Data$GDD <- ImmatureTree_Data$GDD/1000
> ImmatureTree_Data$PCP <- ImmatureTree_Data$PCP/1000
> 
> # coerce variables Immature
> ImmatureTree_Data$DISTRICT <- as.factor(ImmatureTree_Data$DISTRICT)
> ImmatureTree_Data$PLOT_NUM <- as.factor(ImmatureTree_Data$DISTRICT)
> ImmatureTree_Data$TREE_NUM <- as.factor(ImmatureTree_Data$DISTRICT)
> ImmatureTree_Data$PLOTKEY <- as.character(ImmatureTree_Data$DISTRICT)
> ImmatureTree_Data$PLOTKEY_TREE <- as.character(ImmatureTree_Data$DISTRICT)
> ImmatureTree_Data$TREE_STATU <- as.character(ImmatureTree_Data$TREE_STATU)
> ImmatureTree_Data$TREE_STATU[ImmatureTree_Data$TREE_STATU==0] <- " [Live - no defects]"
> ImmatureTree_Data$TREE_STATU[ImmatureTree_Data$TREE_STATU==1] <- " [Dead - standing]"
> ImmatureTree_Data$TREE_STATU[ImmatureTree_Data$TREE_STATU==2] <- " [Dead - leaning or down]"
> ImmatureTree_Data$TREE_STATU[ImmatureTree_Data$TREE_STATU==3] <- " [Live - leaning]"
> ImmatureTree_Data$TREE_STATU[ImmatureTree_Data$TREE_STATU==4] <- " [Live - down]"
> ImmatureTree_Data$TREE_STATU[ImmatureTree_Data$TREE_STATU==5] <- " [Dead - broken top or stem]"
> ImmatureTree_Data$TREE_STATU[ImmatureTree_Data$TREE_STATU==6] <- " [Live - broken top or stem]"
> ImmatureTree_Data$TREE_STATU[ImmatureTree_Data$TREE_STATU==7] <- " [Live - dead top]"
> ImmatureTree_Data$TREE_STATU[ImmatureTree_Data$TREE_STATU==8] <- " [Live - lateral takeover]"
> ImmatureTree_Data$TREE_STATU[ImmatureTree_Data$TREE_STATU==9] <- " [Tree not located]"
> ImmatureTree_Data$SPECIES_CO <- as.character(ImmatureTree_Data$SPECIES_CO)
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="wP"] <- " [White Pine]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="jP"] <- " [Jack Pine]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="Pl"] <- " [Other Pine]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="bS"] <- " [Black Spruce]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="wS"] <- " [White Spruce]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="bF"] <- " [Balsam Fir]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="tL"] <- " [Tamarack]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="tA"] <- " [Trembling Aspen]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="PO"] <- " [Other Poplar]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="wB"] <- " [White Birch]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="yB"] <- " [Yellow Birch]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="rM"] <- " [Red Maple]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="US"] <- " [*Unkown Softwood*]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="UH"] <- " [*Unknown Hardwood*]"
> ImmatureTree_Data$SPECIES_CO[ImmatureTree_Data$SPECIES_CO=="OH"] <- " [Other Hardwoods]"
> ImmatureTree_Data$AGE <- as.character(ImmatureTree_Data$AGE)
> ImmatureTree_Data$YEAR <- as.factor(ImmatureTree_Data$YEAR)
> 
> # coerce variables Mature
> MatureTree_Data$DISTRICT <- as.factor(MatureTree_Data$DISTRICT)
> MatureTree_Data$PLOT_NUM <- as.factor(MatureTree_Data$DISTRICT)
> MatureTree_Data$TREE_NUM <- as.factor(MatureTree_Data$DISTRICT)
> MatureTree_Data$PLOTKEY <- as.character(MatureTree_Data$DISTRICT)
> MatureTree_Data$PLOTKEY_TREE <- as.character(MatureTree_Data$DISTRICT)
> MatureTree_Data$TREE_STATU <- as.character(MatureTree_Data$TREE_STATU)
> MatureTree_Data$TREE_STATU[MatureTree_Data$TREE_STATU==0] <- " [Live - no defects]"
> MatureTree_Data$TREE_STATU[MatureTree_Data$TREE_STATU==1] <- " [Dead - standing]"
> MatureTree_Data$TREE_STATU[MatureTree_Data$TREE_STATU==2] <- " [Dead - leaning or down]"
> MatureTree_Data$TREE_STATU[MatureTree_Data$TREE_STATU==3] <- " [Live - leaning]"
> MatureTree_Data$TREE_STATU[MatureTree_Data$TREE_STATU==4] <- " [Live - down]"
> MatureTree_Data$TREE_STATU[MatureTree_Data$TREE_STATU==5] <- " [Dead - broken top or stem]"
> MatureTree_Data$TREE_STATU[MatureTree_Data$TREE_STATU==6] <- " [Live - broken top or stem]"
> MatureTree_Data$TREE_STATU[MatureTree_Data$TREE_STATU==7] <- " [Live - dead top]"
> MatureTree_Data$TREE_STATU[MatureTree_Data$TREE_STATU==8] <- " [Live - lateral takeover]"
> MatureTree_Data$TREE_STATU[MatureTree_Data$TREE_STATU==9] <- " [Tree not located]"
> MatureTree_Data$SPECIES_CO <- as.character(MatureTree_Data$SPECIES_CO)
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="wP"] <- " [White Pine]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="jP"] <- " [Jack Pine]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="Pl"] <- " [Other Pine]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="bS"] <- " [Black Spruce]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="wS"] <- " [White Spruce]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="bF"] <- " [Balsam Fir]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="tL"] <- " [Tamarack]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="tA"] <- " [Trembling Aspen]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="PO"] <- " [Other Poplar]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="wB"] <- " [White Birch]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="yB"] <- " [Yellow Birch]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="rM"] <- " [Red Maple]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="US"] <- " [*Unkown Softwood*]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="UH"] <- " [*Unknown Hardwood*]"
> MatureTree_Data$SPECIES_CO[MatureTree_Data$SPECIES_CO=="OH"] <- " [Other Hardwoods]"
> MatureTree_Data$YEAR <- as.factor(MatureTree_Data$YEAR)
> 
> # data summaries
> summary(MatureTree_Data)
    DISTRICT       PLOT_NUM       TREE_NUM      PLOTKEY          PLOTKEY_TREE            YEAR       SPECIES_CO         TREE_STATU             DBH          TOTAL_HGT       BA_cm2ha       
 16     : 728   16     : 728   16     : 728   Length:6327        Length:6327        2003   :1006   Length:6327        Length:6327        Min.   : 1.80   Min.   : 1.6   Min.   :   4.072  
 9      : 564   9      : 564   9      : 564   Class :character   Class :character   2000   : 970   Class :character   Class :character   1st Qu.:11.20   1st Qu.: 8.6   1st Qu.: 157.633  
 10     : 513   10     : 513   10     : 513   Mode  :character   Mode  :character   1999   : 940   Mode  :character   Mode  :character   Median :14.00   Median :10.4   Median : 246.301  
 15     : 489   15     : 489   15     : 489                                         2005   : 888                                         Mean   :15.21   Mean   :10.5   Mean   : 328.496  
 8      : 463   8      : 463   8      : 463                                         1998   : 606                                         3rd Qu.:17.90   3rd Qu.:12.2   3rd Qu.: 402.639  
 14     : 456   14     : 456   14     : 456                                         2002   : 574                                         Max.   :47.30   Max.   :21.9   Max.   :2811.461  
 (Other):3114   (Other):3114   (Other):3114                                         (Other):1343                                                                                          
    BA_m2ha          BASTAND_cm2ha    BASTAND_m2ha      BAHW_cm2ha        BAHW_m2ha         BASW_cm2ha      BASW_m2ha     BA_UPPER_cm2ha     BA_UPPER_m2ha        BA_MAX_cm2ha   
 Min.   :0.0004072   Min.   : 1328   Min.   :0.1328   Min.   :    0.0   Min.   :0.00000   Min.   : 2784   Min.   :0.000   Min.   :   3.154   Min.   :0.0003154   Min.   : 199.5  
 1st Qu.:0.0157633   1st Qu.:11132   1st Qu.:1.1132   1st Qu.:    0.0   1st Qu.:0.00000   1st Qu.:10694   1st Qu.:1.069   1st Qu.: 238.258   1st Qu.:0.0238258   1st Qu.: 517.8  
 Median :0.0246301   Median :14621   Median :1.4621   Median :  343.5   Median :0.03435   Median :13377   Median :1.338   Median : 410.531   Median :0.0410531   Median : 694.0  
 Mean   :0.0328496   Mean   :16742   Mean   :1.6742   Mean   : 1433.8   Mean   :0.14338   Mean   :15314   Mean   :1.531   Mean   : 542.346   Mean   :0.0542346   Mean   : 870.8  
 3rd Qu.:0.0402639   3rd Qu.:20004   3rd Qu.:2.0004   3rd Qu.: 1384.0   3rd Qu.:0.13840   3rd Qu.:18044   3rd Qu.:1.804   3rd Qu.: 693.689   3rd Qu.:0.0693689   3rd Qu.:1101.0  
 Max.   :0.2811461   Max.   :65523   Max.   :6.5523   Max.   :31894.1   Max.   :3.18941   Max.   :40272   Max.   :4.027   Max.   :4522.084   Max.   :0.4522084   Max.   :4660.6  
                                                                                          NA's   :1                                                                              
  BA_MAX_m2ha          GROWTH             GDD              PCP              LAT             LONG        ELEV_PROVIDED   ELEV_INTERPOLATED GHI_INTERPOLATED SLOPE_INTERPOLATED
 Min.   :0.01995   Min.   :0.01111   Min.   :0.9842   Min.   :0.9288   Min.   :47.19   Min.   :-58.73   Min.   : 12.0   Min.   : 11.0     Min.   :2.890    Min.   : 0.00078  
 1st Qu.:0.05178   1st Qu.:0.05000   1st Qu.:1.2748   1st Qu.:1.0660   1st Qu.:48.52   1st Qu.:-57.24   1st Qu.:106.0   1st Qu.:122.0     1st Qu.:3.074    1st Qu.: 4.42674  
 Median :0.06940   Median :0.10000   Median :1.3841   Median :1.1244   Median :49.03   Median :-56.22   Median :186.0   Median :190.0     Median :3.109    Median : 7.23443  
 Mean   :0.08708   Mean   :0.12476   Mean   :1.3611   Mean   :1.1645   Mean   :49.05   Mean   :-56.09   Mean   :208.1   Mean   :214.9     Mean   :3.106    Mean   : 9.13263  
 3rd Qu.:0.11010   3rd Qu.:0.17500   3rd Qu.:1.4770   3rd Qu.:1.2425   3rd Qu.:49.48   3rd Qu.:-55.08   3rd Qu.:295.0   3rd Qu.:308.0     3rd Qu.:3.139    3rd Qu.:12.48788  
 Max.   :0.46606   Max.   :1.00000   Max.   :1.6458   Max.   :1.5936   Max.   :51.36   Max.   :-52.77   Max.   :553.0   Max.   :527.0     Max.   :3.345    Max.   :42.10421  
                                                                       NA's   :27      NA's   :27       NA's   :27      NA's   :27        NA's   :27       NA's   :27        
    X          
 Mode:logical  
 NA's:6327     





> str(MatureTree_Data)
'data.frame':   6327 obs. of  32 variables:
 $ DISTRICT          : Factor w/ 17 levels "1","2","4","5",..: 1 1 1 1 1 1 1 1 1 1 ...
 $ PLOT_NUM          : Factor w/ 17 levels "1","2","4","5",..: 1 1 1 1 1 1 1 1 1 1 ...
 $ TREE_NUM          : Factor w/ 17 levels "1","2","4","5",..: 1 1 1 1 1 1 1 1 1 1 ...
 $ PLOTKEY           : chr  "1" "1" "1" "1" ...
 $ PLOTKEY_TREE      : chr  "1" "1" "1" "1" ...
 $ YEAR              : Factor w/ 11 levels "1985","1989",..: 7 7 7 7 7 7 7 7 7 7 ...
 $ SPECIES_CO        : chr  " [Black Spruce]" " [Balsam Fir]" " [Balsam Fir]" " [Balsam Fir]" ...
 $ TREE_STATU        : chr  " [Live - lateral takeover]" " [Live - no defects]" " [Live - dead top]" " [Live - no defects]" ...
 $ DBH               : num  13.4 13 17.2 8 17.8 29.5 11 18.5 21.8 20 ...
 $ TOTAL_HGT         : num  7.2 9.1 10 6 10.1 14.5 9.2 11 10.6 13.4 ...
 $ BA_cm2ha          : num  225.6 212.4 371.8 80.4 398.2 ...
 $ BA_m2ha           : num  0.02256 0.02124 0.03718 0.00804 0.03982 ...
 $ BASTAND_cm2ha     : num  9230 12350 12350 12350 12350 ...
 $ BASTAND_m2ha      : num  0.923 1.235 1.235 1.235 1.235 ...
 $ BAHW_cm2ha        : num  9230 333 333 333 333 ...
 $ BAHW_m2ha         : num  0.923 0.0333 0.0333 0.0333 0.0333 ...
 $ BASW_cm2ha        : num  9230 12018 12018 12018 12018 ...
 $ BASW_m2ha         : num  0.923 1.202 1.202 1.202 1.202 ...
 $ BA_UPPER_cm2ha    : num  753 889 729 1021 703 ...
 $ BA_UPPER_m2ha     : num  0.0753 0.0889 0.0729 0.1021 0.0703 ...
 $ BA_MAX_cm2ha      : num  978 1101 1101 1101 1101 ...
 $ BA_MAX_m2ha       : num  0.0978 0.1101 0.1101 0.1101 0.1101 ...
 $ GROWTH            : num  0.1 0.1 0.1 0.325 0.425 0.025 0.05 0.1 0.1 0.05 ...
 $ GDD               : num  1.53 1.54 1.54 1.54 1.54 ...
 $ PCP               : num  1.3 1.29 1.29 1.29 1.29 ...
 $ LAT               : num  47.2 47.2 47.2 47.2 47.2 ...
 $ LONG              : num  -53 -52.9 -52.9 -52.9 -52.9 ...
 $ ELEV_PROVIDED     : int  127 141 141 141 141 141 141 141 141 141 ...
 $ ELEV_INTERPOLATED : int  87 94 94 94 94 94 94 94 94 94 ...
 $ GHI_INTERPOLATED  : num  3.12 3.14 3.14 3.14 3.14 ...
 $ SLOPE_INTERPOLATED: num  2.29 12.55 12.55 12.55 12.55 ...
 $ X                 : logi  NA NA NA NA NA NA ...
> summary(ImmatureTree_Data)
 DISTRICT  PLOT_NUM  TREE_NUM    PLOTKEY          PLOTKEY_TREE            YEAR       SPECIES_CO         TREE_STATU             DBH           TOTAL_HGT          AGE           
 1:   27   1:   27   1:   27   Length:40196       Length:40196       1994   :8705   Length:40196       Length:40196       Min.   : 0.100   Min.   : 1.300   Length:40196      
 2: 5231   2: 5231   2: 5231   Class :character   Class :character   1998   :8101   Class :character   Class :character   1st Qu.: 2.600   1st Qu.: 2.600   Class :character  
 4: 3508   4: 3508   4: 3508   Mode  :character   Mode  :character   2002   :6819   Mode  :character   Mode  :character   Median : 4.900   Median : 4.200   Mode  :character  
 5:12816   5:12816   5:12816                                         1989   :4892                                         Mean   : 5.683   Mean   : 4.515                     
 6: 8710   6: 8710   6: 8710                                         1990   :3987                                         3rd Qu.: 8.000   3rd Qu.: 6.100                     
 7: 7868   7: 7868   7: 7868                                         1985   :1715                                         Max.   :30.600   Max.   :16.400                     
 8: 2036   8: 2036   8: 2036                                         (Other):5977                                                                                             
  PLOT_SIZE_m2       BA_cm2ha            BA_m2ha          BASTAND_cm2ha       BASTAND_m2ha        BAHW_cm2ha         BAHW_m2ha       BA_UPPER_cm2ha   BA_UPPER_m2ha       BA_MAX_cm2ha     
 Min.   :  20.0   Min.   :   0.0013   Min.   :1.300e-07   Min.   :    44.6   Min.   : 0.00446   Min.   :    0.00   Min.   :0.00000   Min.   :-316.3   Min.   :-0.03163   Min.   :   2.262  
 1st Qu.:  70.0   1st Qu.:   2.2682   1st Qu.:2.268e-04   1st Qu.:  2658.8   1st Qu.: 0.26588   1st Qu.:    0.00   1st Qu.:0.00000   1st Qu.: 150.8   1st Qu.: 0.01449   1st Qu.: 166.190  
 Median : 100.0   Median :   8.4949   Median :8.495e-04   Median :  6079.0   Median : 0.60790   Median :    0.00   Median :0.00000   Median : 559.2   Median : 0.05557   Median : 608.212  
 Mean   : 192.8   Mean   :  26.5832   Mean   :2.658e-03   Mean   : 17885.8   Mean   : 1.78858   Mean   :  515.54   Mean   :0.05053   Mean   : 935.0   Mean   : 0.09296   Mean   : 956.434  
 3rd Qu.: 250.0   3rd Qu.:  27.1716   3rd Qu.:2.717e-03   3rd Qu.: 18756.3   3rd Qu.: 1.87563   3rd Qu.:   73.56   3rd Qu.:0.00721   3rd Qu.:1811.9   3rd Qu.: 0.18117   3rd Qu.:1822.647  
 Max.   :1000.0   Max.   :1560.9317   Max.   :1.561e-01   Max.   :882531.7   Max.   :88.25317   Max.   :15183.38   Max.   :1.51834   Max.   :2130.9   Max.   : 0.21309   Max.   :2131.277  
                                                                                                NA's   :801                          NA's   :232                                           
  BA_MAX_m2ha           VOL_m3ha           VOL_cm3ha            GROWTH              GDD             PCP              LAT             LONG        ELEV_PROVIDED   ELEV_INTERPOLATED
 Min.   :0.0002262   Min.   :0.0000001   Min.   :     0.1   Min.   :0.007692   Min.   :1.053   Min.   :0.9488   Min.   :47.23   Min.   :-55.91   Min.   : 13.0   Min.   : 24.0    
 1st Qu.:0.0166190   1st Qu.:0.0002639   1st Qu.:   263.9   1st Qu.:0.066667   1st Qu.:1.305   1st Qu.:1.0813   1st Qu.:48.30   1st Qu.:-55.13   1st Qu.: 60.0   1st Qu.: 69.0    
 Median :0.0608212   Median :0.0015200   Median :  1520.0   Median :0.125000   Median :1.438   Median :1.1809   Median :48.70   Median :-54.69   Median :116.0   Median :118.0    
 Mean   :0.0956434   Mean   :0.0077339   Mean   :  7733.9   Mean   :0.172492   Mean   :1.407   Mean   :1.2037   Mean   :48.65   Mean   :-54.66   Mean   :116.9   Mean   :123.7    
 3rd Qu.:0.1822647   3rd Qu.:0.0065559   3rd Qu.:  6555.9   3rd Qu.:0.240000   3rd Qu.:1.496   3rd Qu.:1.2669   3rd Qu.:48.99   3rd Qu.:-54.12   3rd Qu.:157.0   3rd Qu.:166.0    
 Max.   :0.2131277   Max.   :0.7735978   Max.   :773597.8   Max.   :1.475000   Max.   :1.665   Max.   :1.6313   Max.   :49.61   Max.   :-53.31   Max.   :300.0   Max.   :313.0    

 GHI_INTERPOLATED SLOPE_INTERPOLATED
 Min.   :3.014    Min.   : 0.5763   
 1st Qu.:3.076    1st Qu.: 4.1655   
 Median :3.101    Median : 6.1261   
 Mean   :3.096    Mean   : 7.1956   
 3rd Qu.:3.116    3rd Qu.: 9.1594   
 Max.   :3.178    Max.   :26.6141   

> str(ImmatureTree_Data)
'data.frame':   40196 obs. of  33 variables:
 $ DISTRICT          : Factor w/ 7 levels "1","2","4","5",..: 6 6 6 6 6 6 6 6 6 6 ...
 $ PLOT_NUM          : Factor w/ 7 levels "1","2","4","5",..: 6 6 6 6 6 6 6 6 6 6 ...
 $ TREE_NUM          : Factor w/ 7 levels "1","2","4","5",..: 6 6 6 6 6 6 6 6 6 6 ...
 $ PLOTKEY           : chr  "7" "7" "7" "7" ...
 $ PLOTKEY_TREE      : chr  "7" "7" "7" "7" ...
 $ YEAR              : Factor w/ 15 levels "1985","1986",..: 1 1 1 1 1 1 1 1 1 1 ...
 $ SPECIES_CO        : chr  " [Balsam Fir]" " [Balsam Fir]" " [Balsam Fir]" " [Balsam Fir]" ...
 $ TREE_STATU        : chr  " [Live - no defects]" " [Live - no defects]" " [Live - no defects]" " [Live - no defects]" ...
 $ DBH               : num  3.8 7.8 7.7 4.1 9.7 6.9 4.8 4.8 5.9 1.4 ...
 $ TOTAL_HGT         : num  4.4 6.3 6 4.7 7 5.3 4.1 4.4 4.3 2 ...
 $ AGE               : chr  "21-40" "21-40" "21-40" "21-40" ...
 $ PLOT_SIZE_m2      : int  40 40 40 40 40 40 40 40 40 40 ...
 $ BA_cm2ha          : num  3.17 13.37 37.25 21.12 11.82 ...
 $ BA_m2ha           : num  0.000317 0.001337 0.003725 0.002112 0.001182 ...
 $ BASTAND_cm2ha     : num  2084 2582 13915 40092 694 ...
 $ BASTAND_m2ha      : num  0.2084 0.2582 1.3915 4.0092 0.0694 ...
 $ BAHW_cm2ha        : num  0.637 291.799 0 NA 159.048 ...
 $ BAHW_m2ha         : num  6.37e-05 2.92e-02 0.00 0.00 1.59e-02 ...
 $ BA_UPPER_cm2ha    : num  1819.5 32.8 1785.4 377 14.2 ...
 $ BA_UPPER_m2ha     : num  0.18195 0.00328 0.17854 0.0377 0.00142 ...
 $ BA_MAX_cm2ha      : num  1822.6 46.2 1822.6 398.2 26.1 ...
 $ BA_MAX_m2ha       : num  0.18226 0.00462 0.18226 0.03982 0.00261 ...
 $ VOL_m3ha          : num  0.000586 0.003537 0.009388 0.00417 0.003476 ...
 $ VOL_cm3ha         : num  586 3537 9388 4170 3476 ...
 $ GROWTH            : num  0.18 0.12 0.02 0.02 0.12 0.04 0.1 0.04 0.04 0.06 ...
 $ GDD               : num  1.34 1.34 1.34 1.34 1.34 ...
 $ PCP               : num  1.52 1.52 1.52 1.52 1.52 ...
 $ LAT               : num  48 48 48 48 48 ...
 $ LONG              : num  -55.6 -55.6 -55.6 -55.6 -55.6 ...
 $ ELEV_PROVIDED     : int  136 136 136 136 136 136 136 136 136 136 ...
 $ ELEV_INTERPOLATED : int  152 152 152 152 152 152 152 152 152 152 ...
 $ GHI_INTERPOLATED  : num  3.11 3.11 3.11 3.11 3.11 ...
 $ SLOPE_INTERPOLATED: num  9.6 9.6 9.6 9.6 9.6 ...
> 
> # linear regression(s) - ALL
> Immature <- lm(GROWTH ~ DBH + TOTAL_HGT + AGE + BASTAND_m2ha + BAHW_m2ha + BA_UPPER_m2ha + BA_MAX_m2ha + GDD + PCP + SLOPE_INTERPOLATED + ELEV_INTERPOLATED + GHI_INTERPOLATED + TREE_STATU + SPECIES_CO, data=ImmatureTree_Data)
Error in `contrasts<-`(`*tmp*`, value = contr.funs[1 + isOF[nn]]) : 
  contrasts can be applied only to factors with 2 or more levels
> Mature <- lm(GROWTH ~ DBH + TOTAL_HGT + BASTAND_m2ha + BAHW_m2ha + BA_UPPER_m2ha + BA_MAX_m2ha + GDD + PCP + SLOPE_INTERPOLATED + ELEV_INTERPOLATED + GHI_INTERPOLATED + TREE_STATU + SPECIES_CO, data=MatureTree_Data)
> 
> # linear regressions - RELATIONSHIPS
> Immature_Relationships <- lm(GROWTH ~ DBH + TOTAL_HGT + AGE + BASTAND_m2ha + BAHW_m2ha + BA_UPPER_m2ha + BA_MAX_m2ha + GDD + PCP + SLOPE_INTERPOLATED + ELEV_INTERPOLATED + GHI_INTERPOLATED + TREE_STATU + SPECIES_CO + GDD:SPECIES_CO + PCP:SPECIES_CO + SLOPE_INTERPOLATED:SPECIES_CO + ELEV_INTERPOLATED:SPECIES_CO + GHI_INTERPOLATED:SPECIES_CO, data=ImmatureTree_Data)
Error in `contrasts<-`(`*tmp*`, value = contr.funs[1 + isOF[nn]]) : 
  contrasts can be applied only to factors with 2 or more levels
> Mature_Relationships <- lm(GROWTH ~ DBH + TOTAL_HGT + BASTAND_m2ha + BAHW_m2ha + BA_UPPER_m2ha + BA_MAX_m2ha + GDD + PCP + SLOPE_INTERPOLATED + ELEV_INTERPOLATED + GHI_INTERPOLATED + TREE_STATU + SPECIES_CO + GDD:SPECIES_CO + PCP:SPECIES_CO + SLOPE_INTERPOLATED:SPECIES_CO + ELEV_INTERPOLATED:SPECIES_CO + GHI_INTERPOLATED:SPECIES_CO, data=MatureTree_Data)
> 
> # linear regression(s) - SLIM
> Immature_Slim <- lm(GROWTH ~ DBH + BASTAND_m2ha + BAHW_m2ha + BA_UPPER_m2ha + BA_MAX_m2ha + GDD + PCP + TREE_STATU + SPECIES_CO, data=ImmatureTree_Data, na.action=na.exclude)
Error in `contrasts<-`(`*tmp*`, value = contr.funs[1 + isOF[nn]]) : 
  contrasts can be applied only to factors with 2 or more levels
> Mature_Slim <- lm(GROWTH ~ DBH + BASTAND_m2ha + BAHW_m2ha + BA_UPPER_m2ha + BA_MAX_m2ha + GDD + PCP + TREE_STATU + SPECIES_CO, data=MatureTree_Data, na.action=na.exclude)

1 个答案:

答案 0 :(得分:0)

这是在准备数据时消除向量变化的问题。 TREE_STATU有“死亡植被”的例子。我最近的尝试尝试删除了。一旦准备好,TREE_STATU下只有一个关于&#39; live&#39;涉及不成熟数据帧的树。在成熟的数据框架中,活树的状态之间存在多个区别。一旦TREE_STATU从不成熟的数据帧中删除,模型就会运行。