Question

我正在尝试从anaconda的Bioconda频道安装一些软件包，但即使添加了频道，我也会遇到以下错误：

C:\Users\matti>conda install -c bioconda pybedtools
Solving environment: failed

PackagesNotFoundError: The following packages are not available from current channels:

  - pybedtools

Current channels:

  - https://conda.anaconda.org/bioconda/win-64
  - https://conda.anaconda.org/bioconda/noarch
  - https://conda.anaconda.org/conda-forge/win-64
  - https://conda.anaconda.org/conda-forge/noarch
  - https://repo.continuum.io/pkgs/main/win-64
  - https://repo.continuum.io/pkgs/main/noarch
  - https://repo.continuum.io/pkgs/free/win-64
  - https://repo.continuum.io/pkgs/free/noarch
  - https://repo.continuum.io/pkgs/r/win-64
  - https://repo.continuum.io/pkgs/r/noarch
  - https://repo.continuum.io/pkgs/pro/win-64
  - https://repo.continuum.io/pkgs/pro/noarch
  - https://repo.continuum.io/pkgs/msys2/win-64
  - https://repo.continuum.io/pkgs/msys2/noarch
  - https://conda.anaconda.org/daler/win-64
  - https://conda.anaconda.org/daler/noarch
  - https://conda.anaconda.org/anaconda-fusion/win-64
  - https://conda.anaconda.org/anaconda-fusion/noarch

对于像bowtie2这样的其他bioconda软件包也会发生这种情况。我已经尝试过普通的pip install和easy_install，但这些都不起作用。有任何想法吗？

Answer 1

从您的命令行看，您在Windows上。在bioconda上有几个pybedtools的版本，但是，如果我通过它们，它们都是用于linux平台的。

如果你使用的是Windows 10，你可以考虑设置'windows subsystem for linux'（可能还有Xming），安装conda，然后安装pybedtools。这显然是一个冗长的方法，但会打开许多bioconda包给你

Answer 2

您是否尝试过以下命令？

conda install --channel bioconda/label/bioconda-utils-test package

或

conda install -c conda-forge python-utils

无法在conda环境中安装bioconda软件包

2 个答案: