Question

我正在使用opencpu / rstudio docker镜像。 Docker运行虚拟机，因为我是Windows用户。运行rstudio-server后，我尝试从github安装我的R包。一切正常，直到rgdal应该安装。

我收到以下错误消息：

Installing rgdal
'/usr/lib/R/bin/R' --no-site-file --no-environ --no-save --no-restore --
quiet  \
CMD INSTALL '/tmp/RtmpJvVTTU/devtools2c362554e5/rgdal'  \
--library='/usr/local/lib/opencpu/site-library' --install-tests 

* installing *source* package ‘rgdal’ ...
** package ‘rgdal’ successfully unpacked and MD5 sums checked
configure: CC: gcc -std=gnu99
configure: CXX: g++
configure: rgdal: 1.2-16
checking for /usr/bin/svnversion... no
configure: svn revision: 701
checking for gdal-config... no
no
configure: error: gdal-config not found or not executable.
ERROR: configuration failed for package ‘rgdal’
* removing ‘/usr/local/lib/opencpu/site-library/rgdal’
Installation failed: Command failed (1)
'/usr/lib/R/bin/R' --no-site-file --no-environ --no-save --no-restore --
 quiet  \
CMD INSTALL  \
'/tmp/RtmpJvVTTU/devtools2cd1cfd76/amun-software-Processingservice-6db3f06'  
 \
--library='/usr/local/lib/opencpu/site-library' --install-tests

我怎么解决这个问题？

Answer 1

有一些遗失的图书馆。

如果您按如下方式登录Docker容器的shell ...

docker exec -it <your docker container name> bash

您可以安装缺少的依赖项...

sudo apt-get update && sudo apt-get install libgdal-dev libproj-dev

退出shell并从RStudio do ...

install.packages("rgdal")

通过Docker在rstudio-server中安装rgdal

1 个答案: