我有参与者的数据,这些参与者进行了大量试验,其中某些试验有一种情况,而其他试验则是另一种情况。
我的分析表明,对于条件1,存在线性零效应(平直线),而对于条件2,存在立方效应。我想把它们画在一起。
下面的代码创建了一个图,它给出了两组的三次函数:
ggplot(dat, aes(x=trial, y=y, group=condition, colour=condition)) +
geom_point() + geom_jitter(height=0.2) +
geom_smooth(alpha=0.1, method="lm", formula = y ~ poly(x,3, raw=TRUE)) +
labs(x="Trial", y="y") +
scale_x_discrete(breaks=c(1,9,18,27,36,45,54,63))
我想要的是没有条件2的三次函数,但具有线性函数。我尝试通过aes()
内的geom_smooth()
调用强制执行此操作,但这似乎为条件1提供了更平坦的三次函数:
ggplot(dat, aes(x=trial, y=y)) +
geom_point(aes(group=condition, colour=condition)) + geom_jitter(height=0.2, aes(group=condition, colour=condition)) +
geom_smooth(alpha=0.1, method="lm", formula = y ~ poly(x,3, raw=TRUE), aes(group=(condition="1"), colour=(condition="1"))) +
geom_smooth(alpha=0.1, method="lm", aes(group=(condition="2"), colour=(condition="2"))) +
labs(x="Trial", y="y") +
scale_x_discrete(breaks=c(1,9,18,27,36,45,54,63))
显然这不是要走的路。我怎么做到这一点?可复制示例的脚本(总数据集的前250行,因此您的数字将有所不同)如下:
structure(list(id = c(3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L,
3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L,
3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L,
3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L, 3L,
3L, 3L, 3L, 3L, 3L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L,
4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L,
4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L,
4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L, 4L,
4L, 4L, 4L, 4L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L,
5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L,
5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L,
5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L, 5L,
5L, 5L, 5L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L,
6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L,
6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L,
6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L, 6L
), trial = c(1L, 2L, 3L, 4L, 5L, 6L, 7L, 8L, 9L, 10L, 11L, 12L,
13L, 14L, 15L, 16L, 17L, 18L, 19L, 20L, 21L, 22L, 23L, 24L, 25L,
26L, 27L, 28L, 29L, 30L, 31L, 32L, 33L, 34L, 35L, 36L, 37L, 38L,
39L, 40L, 41L, 42L, 43L, 44L, 45L, 46L, 47L, 48L, 49L, 50L, 51L,
52L, 53L, 54L, 55L, 56L, 57L, 58L, 59L, 60L, 61L, 62L, 63L, 1L,
2L, 3L, 4L, 5L, 6L, 7L, 8L, 9L, 10L, 11L, 12L, 13L, 14L, 15L,
16L, 17L, 18L, 19L, 20L, 21L, 22L, 23L, 24L, 25L, 26L, 27L, 28L,
29L, 30L, 31L, 32L, 33L, 34L, 35L, 36L, 37L, 38L, 39L, 40L, 41L,
42L, 43L, 44L, 45L, 46L, 47L, 48L, 49L, 50L, 51L, 52L, 53L, 54L,
55L, 56L, 57L, 58L, 59L, 60L, 61L, 62L, 63L, 1L, 2L, 3L, 4L,
5L, 6L, 7L, 8L, 9L, 10L, 11L, 12L, 13L, 14L, 15L, 16L, 17L, 18L,
19L, 20L, 21L, 22L, 23L, 24L, 25L, 26L, 27L, 28L, 29L, 30L, 31L,
32L, 33L, 34L, 35L, 36L, 37L, 38L, 39L, 40L, 41L, 42L, 43L, 44L,
45L, 46L, 47L, 48L, 49L, 50L, 51L, 52L, 53L, 54L, 55L, 56L, 57L,
58L, 59L, 60L, 61L, 62L, 63L, 1L, 2L, 3L, 4L, 5L, 6L, 7L, 8L,
9L, 10L, 11L, 12L, 13L, 14L, 15L, 16L, 17L, 18L, 19L, 20L, 21L,
22L, 23L, 24L, 25L, 26L, 27L, 28L, 29L, 30L, 31L, 32L, 33L, 34L,
35L, 36L, 37L, 38L, 39L, 40L, 41L, 42L, 43L, 44L, 45L, 46L, 47L,
48L, 49L, 50L, 51L, 52L, 53L, 54L, 55L, 56L, 57L, 58L, 59L, 60L,
61L), condition = c(1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 2L,
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L,
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L,
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L,
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L,
2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L, 2L,
2L, 2L, 2L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L),
y = c(NA, NA, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 0L, 0L, 1L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 0L,
1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 0L, 0L, 1L, 0L, 1L, 1L, 0L,
0L, 0L, 1L, 0L, 1L, 1L, 1L, 0L, 1L, 1L, 0L, 0L, 0L, 0L, 1L,
1L, 0L, 1L, 1L, 1L, NA, 1L, 0L, 1L, 1L, 1L, 1L, 0L, 1L, 1L,
1L, 1L, 0L, 1L, 1L, NA, NA, NA, 0L, NA, 0L, NA, 1L, 1L, 0L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 0L, 0L, 1L,
0L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, NA, 0L, 0L, 1L, 0L, 0L, 1L,
1L, 1L, 0L, 0L, 0L, 1L, 1L, 0L, 0L, 0L, 1L, 0L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 0L, 0L, 1L, NA, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 0L, 1L, 0L, 0L, 1L, 1L, 0L, 1L, 1L, 1L, NA,
0L, 1L, 0L, 1L, 1L, 1L, 1L, 1L, 1L, NA, 1L, NA, NA, 1L, 1L,
1L, 1L, NA, 1L, 1L, 1L, 1L, NA, 1L, 0L, 1L, 1L, 1L, 0L, 1L,
0L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 1L, 0L, 1L, 1L, 1L, 1L, 1L,
1L, 1L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 1L, 1L, 0L, 1L, 1L, 0L,
1L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 1L, 0L, 1L, 1L)), .Names = c("id",
"trial", "condition", "y"), row.names = c(NA, 250L), class = "data.frame")
编辑:我没有使用gam或黄土geom_smooth()
的原因是因为条件1中有多个多项式,所以如果我使用该解决方案,它将显示的不仅仅是三次函数。我希望显示三次函数,而不是多个多项式的复合。
答案 0 :(得分:2)
您可以在geom_smooth
内过滤数据。
library(tidyverse)
ggplot(dat, aes(x=trial, y=y, colour=as.factor(condition))) +
geom_point() + geom_jitter(height=0.2) +
geom_smooth(data = filter(dat, condition == 2), alpha=0.1, method="lm", formula = y ~ poly(x,3, raw=TRUE)) +
geom_smooth(data = filter(dat, condition == 1), alpha=0.1, method="lm", formula = y ~ 1) +
labs(x="Trial", y="y") +
scale_x_continuous(breaks=c(1,9,18,27,36,45,54,63))
这给你这个情节