我的目标是从CRAN安装tmap R包。在安装tmap包之前，我已经完成了此安装过程：
https://github.com/mtennekes/tmap/blob/master/ubuntu_17_installation.sh
在install.packages("tmap")之后，我收到一条错误消息，指出了rgdal包的问题。
致电install.packages("rgdal")，我收到了以下内容：
Traceback错误消息的开头：
installing to /home/larnsce/R/x86_64-pc-linux-gnu-library/3.4/rgdal/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
*** caught segfault ***
address 0x1e, cause 'memory not mapped'
回溯结束错误消息：
22: tools:::.test_load_package("rgdal", "/home/larnsce/R/x86_64-pc-linux-gnu-library/3.4")
An irrecoverable exception occurred. R is aborting now ...
Segmentation fault
ERROR: loading failed
* removing ‘/home/larnsce/R/x86_64-pc-linux-gnu-library/3.4/rgdal’
我的sessionInfo()：
R version 3.4.2 (2017-09-28)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 17.04
Matrix products: default
BLAS: /usr/lib/libblas/libblas.so.3.7.0
LAPACK: /usr/lib/lapack/liblapack.so.3.7.0
locale:
[1] LC_CTYPE=en_US.UTF-8 LC_NUMERIC=C LC_TIME=de_CH.UTF-8 LC_COLLATE=en_US.UTF-8 LC_MONETARY=de_CH.UTF-8
[6] LC_MESSAGES=en_US.UTF-8 LC_PAPER=de_CH.UTF-8 LC_NAME=C LC_ADDRESS=C LC_TELEPHONE=C
[11] LC_MEASUREMENT=de_CH.UTF-8 LC_IDENTIFICATION=C
attached base packages:
[1] stats graphics grDevices utils datasets methods base
other attached packages:
[1] bindrcpp_0.2 ggalt_0.4.0 mapdata_2.2-6 maps_3.2.0 sp_1.2-5 ggmap_2.6.1 dplyr_0.7.4
[8] purrr_0.2.3 readr_1.1.1 tidyr_0.7.1 tibble_1.3.4 ggplot2_2.2.1.9000 tidyverse_1.1.1
loaded via a namespace (and not attached):
[1] reshape2_1.4.2 haven_1.1.0 lattice_0.20-35 colorspace_1.3-2 yaml_2.1.14 rlang_0.1.2 foreign_0.8-69
[8] glue_1.1.1 RColorBrewer_1.1-2 modelr_0.1.1 readxl_1.0.0 jpeg_0.1-8 bindr_0.1 plyr_1.8.4
[15] stringr_1.2.0 munsell_0.4.3 gtable_0.2.0 cellranger_1.1.0 rvest_0.3.2 RgoogleMaps_1.4.1 mapproj_1.2-5
[22] psych_1.7.5 labeling_0.3 knitr_1.17 forcats_0.2.0 extrafont_0.17 parallel_3.4.2 Rttf2pt1_1.3.4
[29] broom_0.4.2 proto_1.0.0 Rcpp_0.12.13 KernSmooth_2.23-15 geosphere_1.5-5 scales_0.5.0.9000 jsonlite_1.5
[36] proj4_1.0-8 mnormt_1.5-5 digest_0.6.12 rjson_0.2.15 hms_0.3 png_0.1-7 stringi_1.1.5
[43] ash_1.0-15 grid_3.4.2 tools_3.4.2 magrittr_1.5 lazyeval_0.2.0 extrafontdb_1.0 pkgconfig_2.0.1
[50] MASS_7.3-47 xml2_1.1.1 lubridate_1.6.0 assertthat_0.2.0 httr_1.2.1 R6_2.2.2 nlme_3.1-131
[57] compiler_3.4.2
从源代码安装rgdal会提供以下不同的段错误消息：
*** caught segfault ***
address 0x7fe075206833, cause 'invalid permissions'
这可能是相关的：
./configure: line 2112: 21315 Aborted ./proj_conf_test2
checking PROJ.4: epsg found and readable... yes
./configure: line 2187: 21324 Aborted ./proj_conf_test3
checking PROJ.4: conus found and readable... yes
我探讨的其他相关问题
trouble in installing rgdal on ubuntu 16.04
rgdal installation difficulty on ubuntu 16.04 LTS
这也是在GitHub上发布的问题