在julia中是否有一种方法可以在不加载数据集的情况下列出hdf5文件的字段(包括结构,组,维度)?我没有在HDF5包中找到与h5ls -r -f类似的东西。感谢。
答案 0 :(得分:3)
这是非常粗略的要点h5_get_structure.jl 对于提供以下输出的HDF5文件结构映射:
/Users/TM/Temp/test.h5: HDF5.HDF5File (length 10)
AcquisitionLog: HDF5.HDF5Group (length 0)
AddTraces: HDF5.HDF5Group (length 5)
PTR-Instrument: HDF5.HDF5Group (length 0)
PTR-Misc: HDF5.HDF5Group (length 0)
PTR-Reaction: HDF5.HDF5Group (length 0)
TOFSupply: HDF5.HDF5Group (length 0)
TofSupply: HDF5.HDF5Group (length 2)
TwData: HDF5Dataset ()
TwInfo: HDF5Dataset (28, 2)
FullSpectra: HDF5.HDF5Group (length 3)
MassAxis: HDF5Dataset (100239,)
SumSpectrum: HDF5Dataset (100239, 1)
TofData: HDF5Dataset (100239, 1, 1, 6000)
PTR-Concentration: HDF5.HDF5Group (length 0)
PTR-Peaktable: HDF5.HDF5Group (length 2)
Data: HDF5Dataset (317, 8) Float64
Info: HDF5Dataset (317,)
PTR-PrimaryIonSettings: HDF5.HDF5Group (length 0)
PTR-Transmission: HDF5.HDF5Group (length 0)
PeakData: HDF5.HDF5Group (length 2)
PeakData: HDF5Dataset (317, 1, 1, 6000)
PeakTable: HDF5Dataset (4, 317) Float64
RawData: HDF5.HDF5Group (length 1)
HPTDC: HDF5.HDF5Group (length 0)
TimingData: HDF5.HDF5Group (length 1)
BufTimes: HDF5Dataset (6000,)
答案 1 :(得分:2)
使用print
或names
不是100%的要求,但缺少哪些信息?
e.g。
# make hdf5 file & add two datasets
A = Vector{Int}(1:10)
h5write("bar.h5", "foo", A)
h5write("bar.h5", "2foo", 2A)
i = h5open("bar.h5", "r") # Open it
names(i)
# 2-element Array{String,1}:
# "2foo"
# "foo"
[println(a) for a in i]
# HDF5 dataset: /2foo (file: bar.h5)
# HDF5 dataset: /foo (file: bar.h5)
## Run h5ls
;h5ls "bar.h5"
# 2foo Dataset {10}
# foo Dataset {10}