Question

我已经为以下data set编写了两个不同患者群体之间的Anova计算代码

require(reshape2)
require(ggplot2)
require(ggpubr)
df.m <- melt(HC_BLVP_WM,id.var= "Subjects")
p <- ggboxplot(df.m , x= "Subjects" , y= "value",
               color = "Subjects", palette = "jco",
               add = "jitter",facet.by = "variable",
               scales="free",short.panel.labs = TRUE)+
  xlab("Subjects") + ylab("Volume mm³")+labs(colour = "Subjects") 
p + stat_compare_means(label="p.signif",method = "anova",paired = FALSE)

当我运行代码并尝试使用ggboxplot绘图时，我遇到以下警告消息

" Warning message:
In stringUnit(units) : reached elapsed time limit "

我无法在图像中看到任何Anova p值或统计显着性标记（*），如here所示，我在Ubuntu 16.04上使用Rstudio 1.0.153。有人可以告诉我问题在哪里，它是在我的代码中还是R或其中一个软件包中的错误？我以前从未遇到过这个问题;我能够成功绘制每个箱图上方的p值。

sessionInfo（）的结果是

R version 3.4.2 (2017-09-28)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 16.04.3 LTS

Matrix products: default
BLAS: /usr/lib/libblas/libblas.so.3.6.0
LAPACK: /usr/lib/lapack/liblapack.so.3.6.0

    locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C              
 [3] LC_TIME=de_DE.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=de_DE.UTF-8    LC_MESSAGES=en_US.UTF-8   
 [7] LC_PAPER=de_DE.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C            
[11] LC_MEASUREMENT=de_DE.UTF-8 LC_IDENTIFICATION=C       

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] reshape2_1.4.2 ggpubr_0.1.5   magrittr_1.5   ggplot2_2.2.1 

loaded via a namespace (and not attached):
 [1] Rcpp_0.12.13     dplyr_0.7.4      assertthat_0.2.0 grid_3.4.2      
 [5] plyr_1.8.4       R6_2.2.2         gtable_0.2.0     scales_0.5.0    
 [9] stringi_1.1.5    rlang_0.1.2      lazyeval_0.2.0   bindrcpp_0.2    
[13] tools_3.4.2      stringr_1.2.0    glue_1.1.1       munsell_0.4.3   
[17] compiler_3.4.2   pkgconfig_2.0.1  colorspace_1.3-2 bindr_0.1       
[21] tibble_1.3.4

无法显示Anova p值，警告：已达到已用时间限制

0 个答案: