Question

我正在尝试使用ggplot2从此数据框执行条形图来比较Uniprot和macki列中的数据。

replaceAll()

这是我的R代码：

 Famille Uniprot    Macki
 SN_02     26           7
 SN_03     21          22
 SN_04     16           7
 SN_05      4           0
 SN_09     10           0
 SN_10      5           0
 SN_17      6           0
 SN_19     13           4
 SN_20      3           1
 SN_31      2           0
 SN_32      5           3
 SN_33      3           0
 SN_34      1           0
 SN_37      3           0

这是我得到的情节this horizontal bar plot

你能帮我调试我的代码吗？感谢

Answer 1

将对象添加到ggplot2是通过+，它必须在同一行。最后看一行 - 你必须把+放在那里。修改代码后工作

bar <- c(26, 21, 16,4,10,5,6,13,3,2,5,3,1,3,7,22,7,0,0,0,0,4,1,0,3,0,0,0)
lab <- c("SN_02", "SN_03", "SN_04", "SN_05", "SN_09", "SN_10", "SN_17","SN_19", "SN_20", "SN_31", "SN_32", "SN_33", "SN_34", "SN_37", "SN_02", "SN_03", "SN_04", "SN_05", "SN_09", "SN_10", "SN_17", "SN_19", "SN_20", "SN_31", "SN_32", "SN_33", "SN_34", "SN_37")
pct <- round(bar/sum(bar)*100)
lab <- paste(lab,"%", sep = "")
lab <- paste(lab, pct)
lab0 <- c("SN_02", "SN_03", "SN_04", "SN_05", "SN_09", "SN_10", "SN_17", "SN_19", "SN_20", "SN_31", "SN_32", "SN_33", "SN_34", "SN_37", "SN_02", "SN_03", "SN_04", "SN_05", "SN_09", "SN_10", "SN_17", "SN_19", "SN_20", "SN_31", "SN_32", "SN_33", "SN_34", "SN_37")
nlab <- length(lab)
type <- rep("Uniprot:MACKI", each=nlab/2)
library(ggplot2)
theme_set(theme_bw())
dd <- data.frame(lab0, type, bar, pct)
dd$lab0 <- reorder(dd$lab0,-dd$bar)
ggplot(dd,aes(x=lab0,y=bar,fill=lab0))+
  geom_bar( aes(alpha=factor(bar)) , stat = "identity", position = position_dodge(width=1) ) +
  scale_alpha_discrete( range=c(0.5,1.0) )+
  geom_text( 
    aes( label=paste0(pct,"%") , group=interaction(lab0,type) ), 
    hjust = -0.5, 
    position = position_dodge(width=1)) +
  coord_flip()+
  expand_limits(y = 20) +
  labs(x = "",y = "total")

我建议你也遵循r-code-formatting-guide，这将有助于你以正确的可读方式编写代码。祝你好运！

水平条形图与ggplot2

1 个答案: