Question

当我通过anaconda运行vtk与python时，我遇到以下错误

root@user:~# conda install -c clinicalgraphics vtk=7.1.0
Fetching package metadata ...........
Solving package specifications: .

# All requested packages already installed.
# packages in environment at /home/user/anaconda3:
#
vtk                       7.1.0                    py36_3    clinicalgraphics
root@user~# python
Python 3.6.1 |Anaconda 4.4.0 (64-bit)| (default, May 11 2017, 13:09:58) 
[GCC 4.4.7 20120313 (Red Hat 4.4.7-1)] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import vtk
Traceback (most recent call last):
  File "/home/user/anaconda3/lib/python3.6/site-packages/vtk/vtkCommonCore.py", line 5, in <module>
    from .vtkCommonCorePython import *
ImportError: /home/user/anaconda3/lib/python3.6/site-packages/vtk/../../../libstdc++.so.6: version `CXXABI_1.3.8' not found (required by /home/user/anaconda3/lib/python3.6/site-packages/vtk/../../../libvtkCommonCorePython36D-7.1.so.1)

During handling of the above exception, another exception occurred:

Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "/home/user/anaconda3/lib/python3.6/site-packages/vtk/__init__.py", line 41, in <module>
    from .vtkCommonCore import *
  File "/home/user/anaconda3/lib/python3.6/site-packages/vtk/vtkCommonCore.py", line 9, in <module>
    from vtkCommonCorePython import *
ModuleNotFoundError: No module named 'vtkCommonCorePython'

我尝试使用Install vtk with python 3.6和No module ImportError中提供的解决方案，它们似乎无法正常工作。令人惊讶的是，我在Windows发行版中没有遇到过这个问题。欢迎提出任何其他建议。我真的试图避免从Python3降级到Python2或使用单独的conda环境只是为了vtk ..但如果最终这样做...我想我必须做到这一点。我尝试连接我自己构建的vtk 8的库...这似乎也不起作用

Answer 1

所以我最终使用以下命令创建了基于menpo vtk = 7 python = 3的新环境

root@user:~# conda create --name VTKpythonENV python=3
   .......
root@user:~# conda install -n VTKpythonENV -c menpo vtk=7 python=3
..........
root@user:~# source activate VTKpythonENV
(VTKpythonENV) root@user:~# python
Python 3.6.2 |Continuum Analytics, Inc.| (default, Jul 20 2017, 13:51:32) 
[GCC 4.4.7 20120313 (Red Hat 4.4.7-1)] on linux
Type "help", "copyright", "credits" or "license" for more information.
>>> import vtk

这对我有用，但也欢迎使用临床图形vtk的其他建议

vtk with python 3.6，Anaconda 4.4

1 个答案: