ggplot2按y轴比例排序分类堆积条

时间:2017-08-13 19:47:19

标签: r ggplot2 factors geom-bar

我有一个带有分类x轴的数据框,名为Category,而yaxis是Abundance,由Sequence着色。对于每个类别,我试图通过丰度重新排序堆栈,以便很容易看到哪个序列在底部具有最高比例,在顶部具有最低比例。

目前,我可以制作一个这样的条形图:

s<-"Sequence Abundance Category
CAGTG 0.8 A
CAGTG 0.2 B
CAGTG 0.6 C
CAGTG 0.3 D
CAGTG 0.1 E
GGGAC 0.1 A
GGGAC 0.1 B
GGGAC 0.3 C
GGGAC 0.6 D
GGGAC 0.1 E
CTTGA 0.1 A
CTTGA 0.7 B
CTTGA 0.1 C
CTTGA 0.1 D
CTTGA 0.8 E"

d<-read.delim(textConnection(s),header=T,sep=" ")

g = ggplot(d,aes(x = Category, y = Abundance, fill = Sequence)) + 
      geom_bar(position = "fill",stat = "identity")

我的数据与此非常相似:Ordering stacks by size in a ggplot2 stacked bar graph

但即使尝试重现此解决方案(按照答案中的步骤),它也不按比例重新排序堆栈:

d$Sequence <- reorder(d$Sequence, d$Abundance)
d$Sequence <- factor(d$Sequence, levels=rev(levels(d$Sequence)))
ggplot(d, aes(x=Category, y=Abundance, fill=Sequence)) + 
  geom_bar(stat='identity') 

我找不到我要找的例子。非常感谢您的帮助!

1 个答案:

答案 0 :(得分:3)

使用group美学来控制堆积条的顺序。

s <- "Sequence Abundance Category
CAGTG 0.8 A
CAGTG 0.2 B
CAGTG 0.6 C
CAGTG 0.3 D
CAGTG 0.1 E
GGGAC 0.1 A
GGGAC 0.1 B
GGGAC 0.3 C
GGGAC 0.6 D
GGGAC 0.1 E
CTTGA 0.1 A
CTTGA 0.7 B
CTTGA 0.1 C
CTTGA 0.1 D
CTTGA 0.8 E"  
d <- read.delim(textConnection(s), header=T, sep=" ")

# Add the "group" aesthetic to control the order of the stacked bars
g = ggplot(d,aes(x=Category, y=Abundance, fill=Sequence, group=Abundance)) + 
    geom_bar(position = "fill",stat = "identity")
g

enter image description here