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我最近有一个正在修补的工具箱（RHEL 6.8），它将我的R版本从3.3.3更新到3.4.0。这没有什么大不了的 - 唯一的复杂因素是我必须返回并在新版本下安装我需要的软件包。我依赖的一个包是tm.plugin.webmining包。
我的一个工作失败了，当我手动运行时，我得到了一堆关于该包的垃圾，所以我认为这是搞砸了所以我试图重新安装它，但我不断收到错误。
我考虑过回滚一个版本的R，但这需要大量工作，我真的想继续使用新版本。这是我尝试安装软件包时R会话的控制台输出：
> install.packages("tm.plugin.webmining")
Installing package into â/root/R/x86_64-redhat-linux-gnu-library/3.4â
(as âlibâ is unspecified)
--- Please select a CRAN mirror for use in this session ---
Secure CRAN mirrors
1: 0-Cloud [https] 2: Algeria [https]
3: Australia (Canberra) [https] 4: Australia (Melbourne 1) [https]
5: Australia (Perth) [https] 6: Austria [https]
7: Belgium (Ghent) [https] 8: Brazil (RJ) [https]
9: Brazil (SP 1) [https] 10: Bulgaria [https]
11: Chile 1 [https] 12: China (Lanzhou) [https]
13: Colombia (Cali) [https] 14: Czech Republic [https]
15: Denmark [https] 16: Estonia [https]
17: France (Lyon 1) [https] 18: France (Lyon 2) [https]
19: France (Marseille) [https] 20: France (Montpellier) [https]
21: France (Paris 2) [https] 22: Germany (Göttingen) [https]
23: Germany (Münster) [https] 24: Greece [https]
25: Iceland [https] 26: Indonesia (Jakarta) [https]
27: Ireland [https] 28: Italy (Padua) [https]
29: Japan (Tokyo) [https] 30: Malaysia [https]
31: Mexico (Mexico City) [https] 32: Norway [https]
33: Philippines [https] 34: Serbia [https]
35: Spain (A Coruña) [https] 36: Spain (Madrid) [https]
37: Sweden [https] 38: Switzerland [https]
39: Turkey (Denizli) [https] 40: Turkey (Mersin) [https]
41: UK (Bristol) [https] 42: UK (Cambridge) [https]
43: UK (London 1) [https] 44: USA (CA 1) [https]
45: USA (IA) [https] 46: USA (KS) [https]
47: USA (MI 1) [https] 48: USA (OR) [https]
49: USA (TN) [https] 50: USA (TX 1) [https]
51: Vietnam [https] 52: (other mirrors)
Selection: 50
trying URL 'https://cran.revolutionanalytics.com/src/contrib/tm.plugin.webmining_1.3.tar.gz'
Content type 'application/octet-stream' length 263472 bytes (257 KB)
==================================================
downloaded 257 KB
* installing *source* package âtm.plugin.webminingâ ...
** package âtm.plugin.webminingâ successfully unpacked and MD5 sums checked
** R
** data
** inst
** preparing package for lazy loading
*** caught bus error ***
address 0x7ffcfbdcf870, cause 'non-existent physical address'
Traceback:
1: .External(RinitJVM, boot.classpath, parameters)
2: .jinit()
3: .jpackage(pkgname, lib.loc = libname)
4: fun(libname, pkgname)
5: doTryCatch(return(expr), name, parentenv, handler)
6: tryCatchOne(expr, names, parentenv, handlers[[1L]])
7: tryCatchList(expr, classes, parentenv, handlers)
8: tryCatch(fun(libname, pkgname), error = identity)
9: runHook(".onLoad", env, package.lib, package)
10: loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]])
11: asNamespace(ns)
12: namespaceImportFrom(ns, loadNamespace(j <- i[[1L]], c(lib.loc, .libPaths()), versionCheck = vI[[j]]), i[[2L]], from = package)
13: loadNamespace(package, lib.loc, keep.source, partial = TRUE)
14: withCallingHandlers(expr, packageStartupMessage = function(c) invokeRestart("muffleMessage"))
15: suppressPackageStartupMessages(loadNamespace(package, lib.loc, keep.source, partial = TRUE))
16: code2LazyLoadDB(package, lib.loc = lib.loc, keep.source = keep.source, compress = compress)
17: makeLazyLoading(pkg_name, lib, keep.source = keep.source)
18: doTryCatch(return(expr), name, parentenv, handler)
19: tryCatchOne(expr, names, parentenv, handlers[[1L]])
20: tryCatchList(expr, classes, parentenv, handlers)
21: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call)[1L] prefix <- paste("Error in", dcall, ": ") LONG <- 75L msg <- conditionMessage(e) sm <- strsplit(msg, "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && identical(getOption("show.error.messages"), TRUE)) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
22: try({ suppressPackageStartupMessages(.getRequiredPackages(quietly = TRUE)) makeLazyLoading(pkg_name, lib, keep.source = keep.source)})
23: do_install_source(pkg_name, instdir, pkg, desc)
24: do_install(pkg)
25: tools:::.install_packages()
An irrecoverable exception occurred. R is aborting now ...
/usr/lib64/R/bin/INSTALL: line 34: 19398 Done echo 'tools:::.install_packages()'
19399 Bus error (core dumped) | R_DEFAULT_PACKAGES= LC_COLLATE=C "${R_HOME}/bin/R" $myArgs --slave --args ${args}
The downloaded source packages are in
â/tmp/RtmphtZnGE/downloaded_packagesâ
Warning message:
In install.packages("tm.plugin.webmining") :
installation of package âtm.plugin.webminingâ had non-zero exit status
有没有人有任何建议？对于我的下一步行动，我有点迷失了......谢谢！
查尔斯
答案 0 :(得分：0)
安装3.4.1之后，tm.plugin.webmining包仍然存在安装问题，所以我最终根据需要使用基本包依赖编写自己的函数。只想要发布更新....