Question

我想使用漂亮的汤来找到儿童标签（收益或损失）大于0的标签。然后我想打印内部标签的内容“收益”“损失”和“band.textualrepresentation” ”。这本质上是我想要的脚本（虽然这个不起作用）。

import sys
from BeautifulSoup import BeautifulSoup as Soup

def parseLog(file):
        file = sys.argv[1]
        handler = open(file).read()
        soup = Soup(handler)
        for anytype in soup('anytype', 'gains'.string>0 || 'losses'.string>0):
                gain = anytype.gains.string
                loss = anytype.losses.string
                band = anytype.band.textualrepresentation.string
                print gain loss band

parseLog(sys.argv[1])

我很早就遇到了麻烦，我甚至无法打印收益内容，更不用说打印符合一定条件的内容了。我目前的剧本

def parseLog(file):
        file = sys.argv[1]
        handler = open(file).read()
        soup = Soup(handler)
        for anytype in soup.findall('anytype'):
                gain = anytype.fetch('gains')
                print gain

parseLog(sys.argv[1])

返回

Traceback (most recent call last):
  File "./soup.py", line 13, in <module>
    parseLog(sys.argv[1])
  File "./soup.py", line 9, in parseLog
    for anytype in soup.findall('anytype'):
TypeError: 'NoneType' object is not callable

示例输入

      <anytype xsi:type="GainLossStruct">
         <band>
          <textualrepresentation>
           22q11.1
          </textualrepresentation>
         </band>
         <gains>
          2
         </gains>
         <losses>
          1
         </losses>
         <structs>
          0
         </structs>
        </anytype>
        <anytype xsi:type="GainLossStruct">
         <band>
          <textualrepresentation>
           22q11.2
          </textualrepresentation>
         </band>
         <gains>
          0
         </gains>
         <losses>
          1
         </losses>
         <structs>
          0
         </structs>
        </anytype>
        <anytype xsi:type="GainLossStruct">
         <band>
          <textualrepresentation>
           22q12
          </textualrepresentation>
         </band>
         <gains>
          0
         </gains>
         <losses>
          0
         </losses>
         <structs>
          0
         </structs>
        </anytype>

示例输出

2  1  22q11.1
0  1  22q11.2

更新目前的解决方案

import sys
from BeautifulSoup import BeautifulSoup as Soup

def parseLog(file):
        file = sys.argv[1]
        handler = open(file).read()
        soup = Soup(handler)
        for anytype in soup(lambda x: x.name=='anytype' and (hasattr(x, 'gains') and int(x.gains.string) > 0 or hasattr(x, 'losses') and int(x.losses.string) > 0)):
                gain = anytype.gains.string
                loss = anytype.losses.string
                band = anytype.band.textualrepresentation.string
                print gain, loss, band

parseLog(sys.argv[1])

仍然返回错误

Traceback (most recent call last):
  File "./soup.py", line 15, in <module>
    parseLog(sys.argv[1])
  File "./soup.py", line 9, in parseLog
    for anytype in soup(lambda x: x.name=='anytype' and (hasattr(x, 'gains') and int(x.gains.string) > 0 or hasattr(x, 'losses') and int(x.losses.string) > 0)):
  File "/Users/jacob/homebrew/lib/python2.7/site-packages/BeautifulSoup.py", line 659, in __call__
    return apply(self.findAll, args, kwargs)
  File "/Users/jacob/homebrew/lib/python2.7/site-packages/BeautifulSoup.py", line 849, in findAll
    return self._findAll(name, attrs, text, limit, generator, **kwargs)
  File "/Users/jacob/homebrew/lib/python2.7/site-packages/BeautifulSoup.py", line 377, in _findAll
    found = strainer.search(i)
  File "/Users/jacob/homebrew/lib/python2.7/site-packages/BeautifulSoup.py", line 966, in search
    found = self.searchTag(markup)
  File "/Users/jacob/homebrew/lib/python2.7/site-packages/BeautifulSoup.py", line 924, in searchTag
    or (markup and self._matches(markup, self.name)) \
  File "/Users/jacob/homebrew/lib/python2.7/site-packages/BeautifulSoup.py", line 983, in _matches
    result = matchAgainst(markup)
  File "./soup.py", line 9, in <lambda>
    for anytype in soup(lambda x: x.name=='anytype' and (hasattr(x, 'gains') and int(x.gains.string) > 0 or hasattr(x, 'losses') and int(x.losses.string) > 0)):
AttributeError: 'NoneType' object has no attribute 'string'

即使我将for循环减少到

for anytype in soup(lambda x: x.name=='anytype' and (hasattr(x, 'gains'))):
        gain = anytype.gains.string
        print gain

我还是

Traceback (most recent call last):
  File "./soup.py", line 13, in <module>
    parseLog(sys.argv[1])
  File "./soup.py", line 10, in parseLog
    gain = anytype.gains.string
AttributeError: 'NoneType' object has no attribute 'string'

Answer 1

我会将整个文档解析成一个pandas数据帧，然后执行任何操作;这可能会使数据清理过程更加透明和易于理解。

我将在这里使用xmltojson，因为我不熟悉美丽的汤（尽管我必须将整个内容包含在“document”标签中，因为要使其成为有效的XML）：

import xmltojson
import pandas as pd

with open(file) as f:
    j = eval(xmltojson.parse("<document> "+ f.read() + "</document>"))

df = pd.io.json.json_normalize(j['document']['anytype'])
df.columns = ['type', 'band', 'gain', 'loss', 'struct']
df[(df.gain > '0') | (df.loss > '0')][['band', 'gain', 'loss']]

      band gain loss
0  22q11.1    2    1
1  22q11.2    0    1

Answer 2

代码应为：

for anytype in soup(lambda x: x.name=='anytype' and (int(x.gains.string) > 0 or int(x.losses.string) > 0)):
    gain = anytype.gains.string
    loss = anytype.losses.string
    band = anytype.band.textualrepresentation.string
    print gain loss band

python ||是or，我们需要在执行整数比较之前将字符串转换为数字，例如int(x.gains.string)。希望这有帮助。

使用美丽的汤来获得有条件的课程内容

2 个答案: