我有一个使用Keras和Tensorflow作为我的后端训练的模型,但现在我需要将我的模型转换为某个应用程序的张量流图。我试图这样做并做出预测以确保它正常工作,但是当与从model.predict()收集的结果进行比较时,我得到了非常不同的值。例如:
from keras.models import load_model
import tensorflow as tf
model = load_model('model_file.h5')
x_placeholder = tf.placeholder(tf.float32, shape=(None,7214,1))
y = model(x_placeholder)
x = np.ones((1,7214,1))
with tf.Session() as sess:
sess.run(tf.global_variables_initializer())
print("Predictions from:\ntf graph: "+str(sess.run(y, feed_dict={x_placeholder:x})))
print("keras predict: "+str(model.predict(x)))
返回:
Predictions from:
tf graph: [[-0.1015993 0.07432419 0.0592984 ]]
keras predict: [[ 0.39339241 0.57949686 -3.67846966]]
来自keras预测的值是正确的,但tf图结果不是。
如果它有助于了解最终的预期应用,我正在创建一个带有tf.gradients()函数的jacobian矩阵,但是当与theano的jacobian函数进行比较时,它目前没有返回正确的结果。正确的雅各比。这是我的张量流jacobian代码:
x = tf.placeholder(tf.float32, shape=(None,7214,1))
y = tf.reshape(model(x)[0],[-1])
y_list = tf.unstack(y)
jacobian_list = [tf.gradients(y_, x)[0] for y_ in y_list]
jacobian = tf.stack(jacobian_list)
编辑:型号代码
import numpy as np
from keras.models import Sequential
from keras.layers import Dense, InputLayer, Flatten
from keras.layers.convolutional import Conv1D
from keras.layers.convolutional import MaxPooling1D
from keras.optimizers import Adam
from keras.callbacks import EarlyStopping, ReduceLROnPlateau
# activation function used following every layer except for the output layers
activation = 'relu'
# model weight initializer
initializer = 'he_normal'
# shape of input data that is fed into the input layer
input_shape = (None,7214,1)
# number of filters used in the convolutional layers
num_filters = [4,16]
# length of the filters in the convolutional layers
filter_length = 8
# length of the maxpooling window
pool_length = 4
# number of nodes in each of the hidden fully connected layers
num_hidden_nodes = [256,128]
# number of samples fed into model at once during training
batch_size = 64
# maximum number of interations for model training
max_epochs = 30
# initial learning rate for optimization algorithm
lr = 0.0007
# exponential decay rate for the 1st moment estimates for optimization algorithm
beta_1 = 0.9
# exponential decay rate for the 2nd moment estimates for optimization algorithm
beta_2 = 0.999
# a small constant for numerical stability for optimization algorithm
optimizer_epsilon = 1e-08
model = Sequential([
InputLayer(batch_input_shape=input_shape),
Conv1D(kernel_initializer=initializer, activation=activation, padding="same", filters=num_filters[0], kernel_size=filter_length),
Conv1D(kernel_initializer=initializer, activation=activation, padding="same", filters=num_filters[1], kernel_size=filter_length),
MaxPooling1D(pool_size=pool_length),
Flatten(),
Dense(units=num_hidden_nodes[0], kernel_initializer=initializer, activation=activation),
Dense(units=num_hidden_nodes[1], kernel_initializer=initializer, activation=activation),
Dense(units=3, activation="linear", input_dim=num_hidden_nodes[1]),
])
# compile model
loss_function = mean squared error
early_stopping_min_delta = 0.0001
early_stopping_patience = 4
reduce_lr_factor = 0.5
reuce_lr_epsilon = 0.0009
reduce_lr_patience = 2
reduce_lr_min = 0.00008
optimizer = Adam(lr=lr, beta_1=beta_1, beta_2=beta_2, epsilon=optimizer_epsilon, decay=0.0)
early_stopping = EarlyStopping(monitor='val_loss', min_delta=early_stopping_min_delta,
patience=early_stopping_patience, verbose=2, mode='min')
reduce_lr = ReduceLROnPlateau(monitor='loss', factor=0.5, epsilon=reuce_lr_epsilon,
patience=reduce_lr_patience, min_lr=reduce_lr_min, mode='min', verbose=2)
model.compile(optimizer=optimizer, loss=loss_function)
model.fit(train_x, train_y, validation_data=(cv_x, cv_y),
epochs=max_epochs, batch_size=batch_size, verbose=2,
callbacks=[reduce_lr,early_stopping])
model.save('model_file.h5')
答案 0 :(得分:15)
@frankyjuang把我联系到这里
https://github.com/amir-abdi/keras_to_tensorflow
并将其与
中的代码相结合https://github.com/metaflow-ai/blog/blob/master/tf-freeze/load.py
和
https://github.com/tensorflow/tensorflow/issues/675
我找到了使用tf图预测和创建jacobian函数的解决方案:
import tensorflow as tf
import numpy as np
# Create function to convert saved keras model to tensorflow graph
def convert_to_pb(weight_file,input_fld='',output_fld=''):
import os
import os.path as osp
from tensorflow.python.framework import graph_util
from tensorflow.python.framework import graph_io
from keras.models import load_model
from keras import backend as K
# weight_file is a .h5 keras model file
output_node_names_of_input_network = ["pred0"]
output_node_names_of_final_network = 'output_node'
# change filename to a .pb tensorflow file
output_graph_name = weight_file[:-2]+'pb'
weight_file_path = osp.join(input_fld, weight_file)
net_model = load_model(weight_file_path)
num_output = len(output_node_names_of_input_network)
pred = [None]*num_output
pred_node_names = [None]*num_output
for i in range(num_output):
pred_node_names[i] = output_node_names_of_final_network+str(i)
pred[i] = tf.identity(net_model.output[i], name=pred_node_names[i])
sess = K.get_session()
constant_graph = graph_util.convert_variables_to_constants(sess, sess.graph.as_graph_def(), pred_node_names)
graph_io.write_graph(constant_graph, output_fld, output_graph_name, as_text=False)
print('saved the constant graph (ready for inference) at: ', osp.join(output_fld, output_graph_name))
return output_fld+output_graph_name
呼叫:
tf_model_path = convert_to_pb('model_file.h5','/model_dir/','/model_dir/')
创建函数以将tf模型加载为图形:
def load_graph(frozen_graph_filename):
# We load the protobuf file from the disk and parse it to retrieve the
# unserialized graph_def
with tf.gfile.GFile(frozen_graph_filename, "rb") as f:
graph_def = tf.GraphDef()
graph_def.ParseFromString(f.read())
# Then, we can use again a convenient built-in function to import a graph_def into the
# current default Graph
with tf.Graph().as_default() as graph:
tf.import_graph_def(
graph_def,
input_map=None,
return_elements=None,
name="prefix",
op_dict=None,
producer_op_list=None
)
input_name = graph.get_operations()[0].name+':0'
output_name = graph.get_operations()[-1].name+':0'
return graph, input_name, output_name
使用tf图创建一个模型预测函数
def predict(model_path, input_data):
# load tf graph
tf_model,tf_input,tf_output = load_graph(model_path)
# Create tensors for model input and output
x = tf_model.get_tensor_by_name(tf_input)
y = tf_model.get_tensor_by_name(tf_output)
# Number of model outputs
num_outputs = y.shape.as_list()[0]
predictions = np.zeros((input_data.shape[0],num_outputs))
for i in range(input_data.shape[0]):
with tf.Session(graph=tf_model) as sess:
y_out = sess.run(y, feed_dict={x: input_data[i:i+1]})
predictions[i] = y_out
return predictions
做出预测:
tf_predictions = predict(tf_model_path,test_data)
雅可比功能:
def compute_jacobian(model_path,input_data):
tf_model,tf_input,tf_output = load_graph(model_path)
x = tf_model.get_tensor_by_name(tf_input)
y = tf_model.get_tensor_by_name(tf_output)
y_list = tf.unstack(y)
num_outputs = y.shape.as_list()[0]
jacobian = np.zeros((num_outputs,input_data.shape[0],input_data.shape[1]))
for i in range(input_data.shape[0]):
with tf.Session(graph=tf_model) as sess:
y_out = sess.run([tf.gradients(y_, x)[0] for y_ in y_list], feed_dict={x: input_data[i:i+1]})
jac_temp = np.asarray(y_out)
jacobian[:,i:i+1,:]=jac_temp[:,:,:,0]
return jacobian
计算雅可比矩阵:
jacobians = compute_jacobian(tf_model_path,test_data)