我正在使用coreNLP中的naturalli.OpenIE模块。使用组合选项-triple.all_nominals true和-format reverb时，我得到IndexOutOfBoundsException。请告诉我如何解决它。这是我的行命令：
java -mx2g -cp "/almac/ignacio/corenlp/*" edu.stanford.nlp.naturalli.OpenIE -filelist $HOME/list -triple.all_nominals true -format reverb > trip
其中输入是逐行文件。如果我以不同方式使用上述选项，例如， (-triple.all_nominals false, -format reverb)或(-triple.all_nominals true, -format ollie)。
这是我的输入文件：
the ability of IHF alone to activate fimB expression show IHF to repress ompC transcription
Thus , NanR and NagC appear to activate fimB expression independently .
Thus MarA is able to repress the rob promoter after the preformed open complex clears the promoter .
However , in vitro experiments show IHF to repress ompC transcription from two of its three promoters .
These results show that constitutive and inducible expression of the chromosomal MarA was able to upregulate nfnB expression in contrast with the lack of activation mediated by constitutive expression of the chromosomal SoxS and Rob proteins .
The Rob homologs MarA and SoxS can activate transcription of a broad range of genes in vivo ( reviewed in references 2 and 14 ) , including sodA , fumC , micF , zwf , and inaA , suggesting broadly overlapping activities of these three regulators .
It thus seems likely that the ability of IHF alone to activate fimB expression is enhanced in the D3 mutant background
In conclusion , MelR and CRP bind to the melAB promoter co - operatively to adjacent sites in order to activate transcription in a co - dependent manner
这是输出，我在日志中多次获取。
[main] INFO edu.stanford.nlp.pipeline.StanfordCoreNLP - Adding annotator tokenize
[main] INFO edu.stanford.nlp.pipeline.StanfordCoreNLP - Adding annotator ssplit
[main] INFO edu.stanford.nlp.pipeline.StanfordCoreNLP - Adding annotator pos
Reading POS tagger model from edu/stanford/nlp/models/pos-tagger/english-left3words/english-left3words-distsim.tagger ... done [1.1 sec].
[main] INFO edu.stanford.nlp.pipeline.StanfordCoreNLP - Adding annotator lemma
[main] INFO edu.stanford.nlp.pipeline.StanfordCoreNLP - Adding annotator depparse
Loading depparse model file: edu/stanford/nlp/models/parser/nndep/english_UD.gz ...
PreComputed 100000, Elapsed Time: 2.424 (s)
Initializing dependency parser done [6.8 sec].
[main] INFO edu.stanford.nlp.pipeline.StanfordCoreNLP - Adding annotator natlog
[main] INFO edu.stanford.nlp.pipeline.StanfordCoreNLP - Adding annotator openie
Loading clause searcher from edu/stanford/nlp/models/naturalli/clauseSearcherModel.ser.gz...done [0.210 seconds]
Processing file: /almac/ignacio/rie_gce/karla_tests
All files have been queued; awaiting termination...
/almac/ignacio/rie_gce/karla_tests 0 ability show IHF 1 2 9 10 10 11 1.000 the ability of IHF alone to activate fimB expression show IHF to repress ompC transcription Thus , NanR and NagC appear to activate fimB expression independently . DT NN IN NN RB TO VB NN NN VBP NN TO VB NN NN RB , NN CC NN VBP TO VB NN NN RB . ability show ihf
/almac/ignacio/rie_gce/karla_tests 0 NanR activate NagC 17 18 22 23 19 20 1.000 the ability of IHF alone to activate fimB expression show IHF to repress ompC transcription Thus , NanR and NagC appear to activate fimB expression independently . DT NN IN NN RB TO VB NN NN VBP NN TO VB NN NN RB , NN CC NN VBP TO VB NN NN RB . nanr activate nagc
/almac/ignacio/rie_gce/karla_tests 0 IHF repress ompC transcription 10 11 12 13 13 15 0.620 the ability of IHF alone to activate fimB expression show IHF to repress ompC transcription Thus , NanR and NagC appear to activate fimB expression independently . DT NN IN NN RB TO VB NN NN VBP NN TO VB NN NN RB , NN CC NN VBP TO VB NN NN RB . ihf repress ompc transcription
/almac/ignacio/rie_gce/karla_tests 0 NanR activate independently NagC 17 18 22 26 19 20 1.000 the ability of IHF alone to activate fimB expression show IHF to repress ompC transcription Thus , NanR and NagC appear to activate fimB expression independently . DT NN IN NN RB TO VB NN NN VBP NN TO VB NN NN RB , NN CC NN VBP TO VB NN NN RB . nanr activate independently nagc
/almac/ignacio/rie_gce/karla_tests 0 NanR activate fimB expression 17 18 22 23 23 25 1.000 the ability of IHF alone to activate fimB expression show IHF to repress ompC transcription Thus , NanR and NagC appear to activate fimB expression independently . DT NN IN NN RB TO VB NN NN VBP NN TO VB NN NN RB , NN CC NN VBP TO VB NN NN RB . nanr activate fimb expression
/almac/ignacio/rie_gce/karla_tests 0 NanR activate independently fimB expression 17 18 22 26 23 251.000 the ability of IHF alone to activate fimB expression show IHF to repress ompC transcription Thus , NanR and NagC appear to activate fimB expression independently . DT NN IN NN RB TO VB NN NN VBP NN TO VB NN NN RB , NN CC NN VBP TO VB NN NN RB . nanr activate independently fimb expression
java.lang.IndexOutOfBoundsException: Index: 0, Size: 0
at java.util.ArrayList.rangeCheck(ArrayList.java:653)
at java.util.ArrayList.get(ArrayList.java:429)
at edu.stanford.nlp.ie.util.RelationTriple.toReverbString(RelationTriple.java:373)
at edu.stanford.nlp.naturalli.OpenIE.tripleToString(OpenIE.java:604)
at edu.stanford.nlp.naturalli.OpenIE.processDocument(OpenIE.java:638)
at edu.stanford.nlp.naturalli.OpenIE.lambda$main$12(OpenIE.java:760)
at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:511)
at java.util.concurrent.FutureTask.run(FutureTask.java:266)
at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
at java.lang.Thread.run(Thread.java:745)
DONE processing files. 1 exceptions encountered.
我正在使用stanford-corenlp-3.6.0.jar
非常感谢。