内容类型＆＃39; application / x-gzip＆＃39;长度21914字节（21 KB）

Question

我目前正在研究使用YAML包创建配置文件的R代码。我需要像任何其他代码一样导入和使用某些软件包，但出于某种原因，当我尝试在我的服务器上运行该程序时，它无法正常工作。我有4个我需要的软件包但是我继续使用lubridate运行代码以保持输出简短。如果我可以加载lubridate，我相信我也可以加载其他的。

这是我从终端获得的内容，之后是我的代码。我知道它有点乱，但我只是想让它立即发挥作用。

终端输出：PS我不能发布超过2个链接所以我正在削减输出

  unable to load shared object '/nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so':
  /lib64/libc.so.6: version `GLIBC_2.7' not found (required by /nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so)
ERROR: lazy loading failed for package ‘evaluate’
* removing ‘/nfs/aer/prg/r/lib-linux-x86_64/evaluate’
* restoring previous ‘/nfs/aer/prg/r/lib-linux-x86_64/evaluate’
ERROR: failed to lock directory ‘/nfs/aer/prg/r/lib-linux-x86_64’ for modifying
Try removing ‘/nfs/aer/prg/r/lib-linux-x86_64/00LOCK-lubridate’
* installing *source* package ‘knitr’ ...
** package ‘knitr’ successfully unpacked and MD5 sums checked
** R
** demo
** inst
** preparing package for lazy loading
Error in dyn.load(file, DLLpath = DLLpath, ...) :
  unable to load shared object '/nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so':
  /lib64/libc.so.6: version `GLIBC_2.7' not found (required by /nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so)
Error : unable to load R code in package ‘knitr’
ERROR: lazy loading failed for package ‘knitr’
* removing ‘/nfs/aer/prg/r/lib-linux-x86_64/knitr’

installation of package ‘knitr’ had non-zero exit status
Error in library(lubridate) : there is no package called ‘lubridate’
Execution halted

代码：

#install.packages('lubridate', repos="http://cran.rstudio.com/")
#install.packages('ggplot2', repos="http://cran.rstudio.com/")
#install.packages('plyr', repos="http://cran.rstudio.com/")
#install.packages('yaml', repos="http://cran.rstudio.com/")


install.packages('lubridate', dependencies = TRUE, repos="http://cran.rstudio.com/")
#install.packages("lubridate", repos="http://cran.rstudio.com/")
#install.packages('ggplot2', dependencies = TRUE, repos="http://cran.rstudio.com/")
#install.packages('plyr', dependencies = TRUE, repos="http://cran.rstudio.com/")
#install.packages('yaml', dependencies = TRUE, repos="http://cran.rstudio.com/")

library(lubridate)
#library(lubridate, lib.loc="Y:/work/anne/bin/R Library")
#library(ggplot2)
#library(plyr)
#library(yaml)
#install.packages("lubridate", repos = "http://cran.rstudio.com/", type="source")
#require(lubridate)
#require(ggplot2)
#require(plyr)
#require(yaml)
#  install.packages("lubridate", repos="C:/Users/hadi/Documents/R/R-3.1.1/library") 
#library("lubridate")
  #install.packages("ggplot2", repos="http://cran.rstudio.com/") 
  #library("ggplot2")
  #install.packages("plyr", repos="http://cran.rstudio.com/") 
  #library("plyr")
  #install.packages("yaml", repos="http://cran.rstudio.com/") 
  #library("yaml")


#install_github("lubridate")
#install_github("ggplot2")
#install_github("plyr")
#install_github("yaml")




#Set Working Directory
#setwd('~/Desktop/Front End Testing/Binning Data')######
#Read Config File
config = yaml.load_file('BinConfig.yaml')
#Create Dataframe of the data
dataframe<-read.csv(config$db$dataframe)
#Filter up to 5 Variables at a time or as few as 1 or even 0 variables
dataframe<-dataframe[which(dataframe[config$db$filter1VarName]>=config$db$filter1greaterthanorequalto),]
dataframe<-dataframe[which(dataframe[config$db$filter1VarName]<=config$db$filter1lessthanorequalto),]
dataframe<-dataframe[which(dataframe[config$db$filter2VarName]>=config$db$filter2greaterthanorequalto),]
dataframe<-dataframe[which(dataframe[config$db$filter2VarName]<=config$db$filter2lessthanorequalto),]
#If you do not need this many filters just leave as is with "#" in front. You will get an error but it does not affect the program
dataframe<-dataframe[which(dataframe[config$db$filter3VarName]>=config$db$filter3greaterthanorequalto),]
dataframe<-dataframe[which(dataframe[config$db$filter3VarName]<=config$db$filter3lessthanorequalto),]
#If you do not need this many filters just leave as is with "#" in front. You will get an error but it does not affect the program
dataframe<-dataframe[which(dataframe[config$db$filter4VarName]>=config$db$filter4greaterthanorequalto),]
dataframe<-dataframe[which(dataframe[config$db$filter4VarName]<=config$db$filter4lessthanorequalto),]
#If you do not need this many filters just leave as is with "#" in front. You will get an error but it does not affect the program
dataframe<-dataframe[which(dataframe[config$db$filter5VarName]>=config$db$filter5greaterthanorequalto),]
dataframe<-dataframe[which(dataframe[config$db$filter5VarName]<=config$db$filter5lessthanorequalto),]
#Best kept small. This way if you have narrow bins you can still hit the min # of bins
xBinSize<-config$db$xMinBinSize;
#This is the number of bins you want provided the xBinSize allows for the number of bins
minXBins<- config$db$minXBins;
stationColors <- rainbow(length(stations));
plotX<-vector('list',length(stations));
plotY<-vector('list',length(stations));
stn<-stations
#dataframe<-subset(dataframe,ZAngSGR0_XI<2.7)
#Absorption_Angstrom_Exponent_BG_PM10


#For our application change these two red lines below to fit the column name you wissh to use. Name must be the same as in the data frame        
rawX <- c(dataframe[paste(c(config$db$XVar), collapse="")][TRUE,1],
        dataframe[paste(c(config$db$XVar), collapse="")][TRUE,1]);        
rawY <- c(dataframe[paste(c(config$db$YVar), collapse="")][TRUE,1],
        dataframe[paste(c(config$db$YVar), collapse="")][TRUE,1]);


dataX <- rawX[!is.na(rawX) & !is.na(rawY)];
dataY <- rawY[!is.na(rawX) & !is.na(rawY)];
# Figure out the bin range and bin size
rX <- range(dataX);
useBinSize <- xBinSize;
    rX[1] <- floor(rX[1] / useBinSize) * useBinSize;
    rX[2] <- ceiling(rX[2] / useBinSize) * useBinSize;
    if ((rX[2] - rX[1]) > useBinSize * minXBins) {
        rX <- range(dataX);
        useBinSize <- (rX[2] - rX[1]) / minXBins;
    }# < useBinSize * minXBins
    nBins <- (rX[2] - rX[1]) / useBinSize ;
    # Bin the data
    bins <- seq(rX[1],rX[2], useBinSize);
    outY <- seq(1,nBins);
    outX <- seq(1,nBins);#bins
    rows<-length(dataX)
    outXBin1<-NULL
    outXBindims=NULL
    for (bin in seq(1,nBins)) {
        outY[bin] <- mean(dataY[dataX>=bins[bin] & dataX<bins[bin+1]],na.rm=T);
        outXBin1[bin] <- as.data.frame(dataX[dataX>=bins[bin] & dataX<bins[bin+1]]);
        outXBindims[bin]<-length(outXBin1[[bin]])

        #outYBinF[,bin] <- (dataY[dataX>=bins[bin] & dataX<bins[bin+1]]);
        outX[bin] <- mean(c(bins[bin], bins[bin+1]));
        #outXBinF[,bin] <- (c(bins[bin], bins[bin+1]));
    }

    plotX <- data.frame(outX[!is.na(outY)]);
    plotY <- data.frame(outY[!is.na(outY)]);
    weight<-data.frame(outXBindims[!is.na(outY)]);
    DF<-cbind(plotX,plotY,weight)
    names(DF)[names(DF)=='outX..is.na.outY..']<-config$db$XVar
        names(DF)[names(DF)=='outY..is.na.outY..']<-config$db$YVar
            names(DF)[names(DF)=='outXBindims..is.na.outY..']<-config$db$Y2Var
                #DF$FrequencyPercent<-(DF[config$db$Y2Var]/(sum(DF[config$db$Y2Var]))*100)
            #names(DF)[names(DF)=='FrequencyPercent']<-c("Frequency Percent")
write.csv(DF,config$db$BinnedDataName)

Answer 1

所以我只使用install.packages（）和库运行它....这就是我得到的错误：P.S。我没有足够的声誉来发布2个以上的链接，所以我继续做了https htps，所以我仍然可以发布整个事情......

                                                                                                                             Installing package into ‘/nfs/aer/prg/r/lib-linux-x86_64’

（因为'lib'未指定）还要安装依赖项'evaluate'，'knitr'

尝试网址＆＃39; htp：//cran.rstudio.com/src/contrib/evaluate_0.10.tar.gz'

内容类型＆＃39; application / x-gzip＆＃39;长度21914字节（21 KB）

下载了21 KB

尝试网址＆＃39; htp：//cran.rstudio.com/src/contrib/knitr_1.15.1.tar.gz'

内容类型＆＃39; application / x-gzip＆＃39;长度1027808字节（1003 KB）

已下载1003 KB

尝试网址＆＃39; htp：//cran.rstudio.com/src/contrib/lubridate_1.6.0.tar.gz'

内容类型＆＃39; application / x-gzip＆＃39;长度317672字节（310 KB）

下载了310 KB

安装源包“评估”... **包'评估'成功解包并检查MD5总和 ** R. **准备延迟装载包 dyn.load中的错误（文件，DLLpath = DLLpath，...）：无法加载共享对象＆＃39; /nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so'： /lib64/libc.so.6：版本`GLIBC_2.7＆＃39;找不到（/nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so要求）错误：包“评估”
删除'/ nfs / aer / prg / r / lib-linux-x86_64 / evaluate'
恢复上一个'/ nfs / aer / prg / r / lib-linux-x86_64 / evaluate' 错误：无法锁定目录'/ nfs / aer / prg / r / lib-linux-x86_64'以进行修改尝试删除'/ nfs / aer / prg / r / lib-linux-x86_64 / 00LOCK-lubridate'
安装源包'knitr'... **包'knitr'成功解包并检查MD5总和 ** R. **演示 ** inst **准备延迟装载包 dyn.load中的错误（文件，DLLpath = DLLpath，...）：无法加载共享对象＆＃39; /nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so'： /lib64/libc.so.6：版本`GLIBC_2.7＆＃39;找不到（/nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so要求）错误：无法在包'knitr'中加载R代码错误：包'knitr'
删除'/ nfs / aer / prg / r / lib-linux-x86_64 / knitr'

下载的源包在 “/ TMP / RtmpDtWu7K / downloaded_packages” 警告信息： 1：在install.packages中（＆＃34; lubridate＆＃34;，dependencies = TRUE，repos =＆＃34; htp：//cran.rstudio.com/"）：软件包'evaluate'的安装具有非零退出状态 2：在install.packages中（＆＃34; lubridate＆＃34;，dependencies = TRUE，repos =＆＃34; htp：//cran.rstudio.com/"）： 'lubridate'软件包的安装具有非零退出状态 3：在install.packages中（＆＃34; lubridate＆＃34;，dependencies = TRUE，repos =＆＃34; htp：//cran.rstudio.com/"）： 'knitr'包的安装具有非零退出状态库中的错误（lubridate）：没有名为'lubridate'的包执行停止 [气候：/ aer / work / anne / bin] $ R --slave -f Bin.r 将软件包安装到'/ nfs / aer / prg / r / lib-linux-x86_64' （因为'lib'未指定）还要安装依赖项'evaluate'，'knitr'

尝试网址＆＃39; htp：//cran.rstudio.com/src/contrib/evaluate_0.10.tar.gz'

内容类型＆＃39; application / x-gzip＆＃39;长度21914字节（21 KB）

下载了21 KB

尝试网址＆＃39; htp：//cran.rstudio.com/src/contrib/knitr_1.15.1.tar.gz'

内容类型＆＃39; application / x-gzip＆＃39;长度1027808字节（1003 KB）

已下载1003 KB

尝试网址＆＃39; htp：//cran.rstudio.com/src/contrib/lubridate_1.6.0.tar.gz'

内容类型＆＃39; application / x-gzip＆＃39;长度317672字节（310 KB）

下载了310 KB

安装源包“评估”... **包'评估'成功解包并检查MD5总和 ** R. **准备延迟装载包 dyn.load中的错误（文件，DLLpath = DLLpath，...）：无法加载共享对象＆＃39; /nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so'： /lib64/libc.so.6：版本`GLIBC_2.7＆＃39;找不到（/nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so要求）错误：包“评估”
删除'/ nfs / aer / prg / r / lib-linux-x86_64 / evaluate'
恢复上一个'/ nfs / aer / prg / r / lib-linux-x86_64 / evaluate' 错误：无法锁定目录'/ nfs / aer / prg / r / lib-linux-x86_64'以进行修改尝试删除'/ nfs / aer / prg / r / lib-linux-x86_64 / 00LOCK-lubridate'
安装源包'knitr'... **包'knitr'成功解包并检查MD5总和 ** R. **演示 ** inst **准备延迟装载包 dyn.load中的错误（文件，DLLpath = DLLpath，...）：无法加载共享对象＆＃39; /nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so'： /lib64/libc.so.6：版本`GLIBC_2.7＆＃39;找不到（/nfs/aer/prg/r/lib-linux-x86_64/stringi/libs/stringi.so要求）错误：无法在包'knitr'中加载R代码错误：包'knitr'
删除'/ nfs / aer / prg / r / lib-linux-x86_64 / knitr'

下载的源包在 “/ TMP / RtmpJUL44H / downloaded_packages” 警告信息： 1：在install.packages中（＆＃34; lubridate＆＃34;，dependencies = TRUE，repos =＆＃34; htp：//cran.rstudio.com/"）：软件包'evaluate'的安装具有非零退出状态 2：在install.packages中（＆＃34; lubridate＆＃34;，dependencies = TRUE，repos =＆＃34; htp：//cran.rstudio.com/"）： 'lubridate'软件包的安装具有非零退出状态 3：在install.packages中（＆＃34; lubridate＆＃34;，dependencies = TRUE，repos =＆＃34; htp：//cran.rstudio.com/"）： 'knitr'包的安装具有非零退出状态库中的错误（lubridate）：没有名为'lubridate'的包执行暂停

感谢您的耐心

从终端包运行R代码时将无法正确加载

1 个答案:

内容类型＆＃39; application / x-gzip＆＃39;长度21914字节（21 KB）

内容类型＆＃39; application / x-gzip＆＃39;长度1027808字节（1003 KB）

内容类型＆＃39; application / x-gzip＆＃39;长度317672字节（310 KB）

内容类型＆＃39; application / x-gzip＆＃39;长度21914字节（21 KB）

内容类型＆＃39; application / x-gzip＆＃39;长度1027808字节（1003 KB）

内容类型＆＃39; application / x-gzip＆＃39;长度317672字节（310 KB）