如何使用HDF5源代码编译c程序?

时间:2017-04-01 00:07:10

标签: c++ c hdf5 scientific-computing

我有特定的要求,我想编译和执行一些具有HDF5依赖关系的代码。 我不想使用/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * Copyright by The HDF Group. * * Copyright by the Board of Trustees of the University of Illinois. * * All rights reserved. * * * * This file is part of HDF5. The full HDF5 copyright notice, including * * terms governing use, modification, and redistribution, is contained in * * the files COPYING and Copyright.html. COPYING can be found at the root * * of the source code distribution tree; Copyright.html can be found at the * * root level of an installed copy of the electronic HDF5 document set and * * is linked from the top-level documents page. It can also be found at * * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * * access to either file, you may request a copy from help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* * This example illustrates how to create a dataset that is a 4 x 6 * array. It is used in the HDF5 Tutorial. */ #include "hdf5.h" #define FILE "dset.h5" int main() { hid_t file_id, dataset_id, dataspace_id; /* identifiers */ hsize_t dims[2]; herr_t status; /* Create a new file using default properties. */ file_id = H5Fcreate(FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); /* Create the data space for the dataset. */ dims[0] = 4; dims[1] = 6; dataspace_id = H5Screate_simple(2, dims, NULL); /* Create the dataset. */ dataset_id = H5Dcreate2(file_id, "/dset", H5T_STD_I32BE, dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); /* End access to the dataset and release resources used by it. */ status = H5Dclose(dataset_id); /* Terminate access to the data space. */ status = H5Sclose(dataspace_id); /* Close the file. */ status = H5Fclose(file_id); } ,但我想编译HDF5源代码。

我对如何将HDF5链接到我的C程序非常新。请您详细解释如何操作,这样我就可以使用c编译器执行此程序并链接从here下载的源文件。

示例C程序 -

{
  "queryType":"SQL",
  "query": "CREATE TABLE st.`repo`.`test` AS SELECT * FROM st.`repo`.`unicode_data`"
}

1 个答案:

答案 0 :(得分:3)

对于编译,必须将-I标志指向HDF5的include目录。对于系统安装,它通常为/usr/include,但有许多变化,具体取决于HDF5是以串行还是并行方式安装,32/64位等。用于链接-L和{{1标志是重要的。 -l应该指向包含HDF5库的-L.so.dll文件的目录(同样,可能有变体),而.dylib只是简单地给出库名称-l和其他名称(我相信-lhdf5-lz几乎总是被使用)。如果您使用高级库,则需要-lm

检查这些标志的最简单方法是调用

-lhdf5_hl

将列出所有内容。

PS:您可以一步编译和链接(从h5cc -show 到可执行文件)或首先编译(.c.c)然后链接(.o到可执行文件)。在第一种情况下,需要所有.o-I-L标记。