带有pandas和多处理的Python IndexError

时间:2017-03-06 23:28:34

标签: python pandas python-multiprocessing

我正在尝试将很多xml文件转换成可读的csv文件,这些文件是我从squawka.com上删除的。我找到了一个可以做到这一点的脚本,但它总是引发这个错误:

Traceback (most recent call last):
  File "<stdin>", line 1, in <module>
  File "squawka\utils.py", line 227, in export_all_stats
    df = pd.concat(pool.imap(partial_loader, xml_paths), axis=0, ignore_index=True)
  File "C:\Python27\lib\site-packages\pandas\tools\merge.py", line 812, in concat
    copy=copy)
  File "C:\Python27\lib\site-packages\pandas\tools\merge.py", line 842, in __init__
    objs = list(objs)
  File "C:\Python27\lib\multiprocessing\pool.py", line 668, in next
    raise value
IndexError: list index out of range

我正在尝试使用此脚本中的函数export_all_stats:

import gc
import glob
import logging
import multiprocessing
import numpy as np
import os
import pandas as pd
import re
import warnings
from dateutil import parser
from functools import partial
from lxml import etree


COMPETITIONS = {
    4: 'World Cup',
    5: 'Champions League',
    6: 'Europa League',
    8: 'English Barclays Premier League',
    9: 'Dutch Eredivisie',
    10: 'Football League Championship',
    21: 'Italian Serie A',
    22: 'German Bundesliga',
    23: 'Spanish La Liga',
    24: 'French Ligue 1',
    98: 'US Major League Soccer',
    114: 'Turkish Super Lig',
    129: 'Russian Premier League',
    199: 'Mexican Liga MX - Apertura',
    214: 'Australian A-League',
    363: 'Brazilian Serie A',
    385: 'Mexican Liga MX - Clausura',
}


TIME_SLICE_EVENTS = [
    'action_areas',
    'all_passes',
    'balls_out',
    'blocked_events',
    'cards',
    'clearances',
    'corners',
    'crosses',
    'extra_heat_maps',
    'fouls',
    'goal_keeping',
    'goals_attempts',
    'headed_duals',
    'interceptions',
    'keepersweeper',
    'offside',
    'oneonones',
    'setpieces',
    'tackles',
    'takeons',
]
ALL_STATISTICS = sorted(TIME_SLICE_EVENTS + ['players', 'teams'])

logger = logging.getLogger()
handler = logging.StreamHandler()
formatter = logging.Formatter('%(asctime)s %(name)-12s %(levelname)-8s %(message)s')
handler.setFormatter(formatter)
logger.addHandler(handler)
logger.setLevel(logging.DEBUG)


class SquawkaReport:
    """Squawka match report object.

    :param path: Path to XML-file to generate match report from.
    """

    def __init__(self, path):
        self.__time_slice_events = TIME_SLICE_EVENTS
        self.path = path
        self.xml = self.read_xml(path)

    # See: https://stackoverflow.com/questions/10967551/how-do-i-dynamically-create-properties-in-python
    def __getattr__(self, name):
        if name in self.__time_slice_events:
            return self._parse_timeslice(name)
        else:
            msg = "'{0}' object has no attribute '{1}'"
            raise AttributeError(msg.format(type(self).__name__, name))

    @staticmethod
    def read_xml(path):
        """Read XML file.
        :param path: Path to XML-file.
        :return: XML tree.
        """
        with open(path, 'r') as f:
            data = f.read()
        xml = etree.fromstring(data)
        return xml

    def _parse_timeslice(self, filter_type):
        xpath = '/squawka/data_panel/filters/{filter_type}/time_slice/event'
        return self._get_elements(xpath.format(filter_type=filter_type))

    def _get_elements(self, xpath):
        elements = self.xml.xpath(xpath)
        if elements:
            return self._parse_elements(elements)
        else:
            return None

    def _parse_elements(self, elements):
        parsed = [dict({c.tag: c.text for c in
                        e.getchildren()}.items() + e.attrib.items())
                  for e in elements]
        return parsed

    @property
    def competition(self):
        return re.findall("/(.*)_\d*.xml", self.path)[0]

    @property
    def filters(self):
        filters_element = self.xml.xpath('/squawka/data_panel/filters')
        if filters_element:
            return [ch.tag for ch in filters_element[0].getchildren()]
        # Some match reports don't have data.
        else:
            return None

    @property
    def kickoff(self):
        date = self.xml.xpath("/squawka/data_panel/game/kickoff/text()")[0]
        return parser.parse(date).strftime('%Y-%m-%d %H:%M:%S %z')

    @property
    def match_id(self):
        return int(re.findall("/.*_(\d+).xml", self.path)[0])

    @property
    def name(self):
        return self.xml.xpath("/squawka/data_panel/game/name/text()")[0]

    @property
    def players(self):
        # TODO: Remove non-player elements
        xpath = '/squawka/data_panel/players/player'
        return self._get_elements(xpath)

    @property
    def teams(self):
        xpath = '/squawka/data_panel/game/team'
        return self._get_elements(xpath)

    @property
    def venue(self):
        return self.xml.xpath("/squawka/data_panel/game/venue/text()")[0]

    @property
    def match_info(self):
        info = ({
            'competition': self.competition,
            'kickoff': self.kickoff,
            'match_id': self.match_id,
            'name': self.name,
            'venue': self.venue,
        })
        for team in self.teams:
            for k in ['id', 'short_name']:
                info['_'.join((team['state'], k))] = team[k]
        return info


def stats_from_file(path, statistic, convert=True):
    """Load data for a statistic from file.

    :param path: Path to file.
    :param statistic: Statistic to load (e.g. 'goals_attempts', 'cards').
    :param convert: Process and clean the data (boolean)
    :return pd.DataFrame with data
    """
    report = SquawkaReport(path)
    return stats_from_report(report, statistic, convert)


def stats_from_report(report, statistic, convert=True):
    """Load data for a statistic from a SquawkaReport object.

    :param report: SquawkaReport object
    :param statistic: Statistic to load (e.g. 'goals_attempts', 'cards').
    :param convert: Process and clean the data (boolean)
    :return pd.DataFrame with data
    """
    stats = pd.DataFrame(getattr(report, statistic))
    stats['competition'] = report.competition
    stats['kickoff'] = report.kickoff
    stats['match_id'] = report.match_id
    if convert:
        return convert_export(stats)
    else:
        return stats


def export_all_stats(xml_dir, out_dir, statistics=ALL_STATISTICS, convert=True, n_jobs=None,
                     sequential=('all_passes', 'extra_heat_maps')):
    """Export all statistics from all XML-files in a folder to CSV.

    :param xml_dir: Path to folder containing XML-files
    :param out_dir: Path to folder to save output to
    :param statistics: Statistics to export
    :param convert: Process and clean the data (boolean)
    :param n_jobs: Number of processes to use
    :param sequential: Iterable with statistics to process sequentially (for memory-intensive stats)
    """

    xml_paths = glob.glob(os.path.join(xml_dir, '*.xml'))

    if n_jobs is None:
        n_jobs = multiprocessing.cpu_count() - 1

    if not os.path.exists(out_dir):
        os.makedirs(out_dir)

    pool = multiprocessing.Pool(n_jobs)
    for statistic in statistics:
        if statistic in sequential:
            df = pd.concat((_load_xml(p, statistic) for p in xml_paths), axis=0, ignore_index=True)
        else:
            partial_loader = partial(_load_xml, statistic=statistic)
            df = pd.concat(pool.imap(partial_loader, xml_paths), axis=0, ignore_index=True)
        if convert:
            df = convert_export(df)
        save_path = os.path.join(out_dir, '{}.csv'.format(statistic))
        df.to_csv(save_path, index=False, encoding='utf8')
        logger.debug("Exported %s to %s", statistic, save_path)


def _load_xml(path, statistic):
    """Load XML files ignoring etree.XMLSyntaxErrors.

    :param path: Path to file.
    :param statistic: Statistic to load (e.g. 'goals_attempts', 'cards').
    :return: XML tree (or None on etree.XMLSyntaxError).
    """
    try:
        return stats_from_file(path, statistic)
    except etree.XMLSyntaxError:
        msg = "XML error loading {}, skipping it...".format(path)
        warnings.warn(msg, RuntimeWarning)


def convert_export(df):
    """Convert a statistics export.
    :param df: pd.DataFrame with statistics (see e.g. stats_from_file())
    :return: processed pd.DataFrame
    """

    def parse_indicator(s, indicator):
        return s.notnull() & (s == indicator)  # Nulls are interpreted as False

    convert_cols = {
        'id': 'int',
        'match_id': 'int',
        'mins': 'int',
        'minsec': 'int',
        'secs': 'int',
        'team_id': 'int'
    }
    coordinate_cols = [
        'end',
        'loc',
        'middle',
        'start',
    ]
    indicator_cols = {
        'is_own': 'yes',
        'headed': 'true',  # Note: ignores all falses
        'shot': 'true',  # Note: ignores all falses
    }
    # Convert strings to ints.
    for col in df.columns.intersection(convert_cols):
        df[col] = df[col].replace('', -1)
        df.loc[df[col].isnull(), col] = -1
        df[col] = df[col].astype(convert_cols[col])

    # Convert indicator cols.
    for col in df.columns.intersection(indicator_cols):
        df[col] = parse_indicator(df[col], indicator_cols[col])

    # Convert coordinate cols.
    for col in df.columns.intersection(coordinate_cols):
        df[[col + '_x', col + '_y']] = split_coordinates(df[col])
        df.drop(col, axis=1, inplace=True)

    return df


def split_coordinates(s):
    """Split Series containing strings with coordinates into a DataFrame.

    :param s: pd.Series
    :return: pd.DataFrame with columns 'x' and 'y'
    """
    if s.notnull().all():
        concatenated = s
    else:
        concatenated = s.copy()
        concatenated.loc[concatenated.isnull()] = ','
    split = pd.DataFrame(concatenated.str.split(',').tolist(), columns=['x', 'y'], dtype=float)
    return split.replace('', np.nan)

我对此很新,所以我不知道出了什么问题。我试图谷歌它,但没有找到答案。有人可以帮助我吗?

1 个答案:

答案 0 :(得分:0)

我会通过将pool.imap(partial_loader, xml_paths)分配给变量并查看结果的形状来开始进行故障排除。将该对象传递给pd.concat存在一些问题。在没有看到该对象的情况下,我的猜测是该对象实际上没有要忽略的索引,当您设置ignore_index=True时,它会尝试查找不存在的内容,因此IndexError: list index out of range