当我在文件夹中有文件时,我收到一个文件不存在的错误,请告诉我我在哪里犯了错误?
pd.DataFrame.from_csv
我收到的错误如下所示。
Traceback (most recent call last):
File "main.py", line 194, in <module>
start_path+end_res)
File "/Users/admin/Desktop/script/mergeT.py", line 5, in merge
df_peak = pd.DataFrame.from_csv(peak_score, index_col = False, sep='\t')
File "/Library/Python/2.7/site-packages/pandas/core/frame.py", line 1231, in from_csv
infer_datetime_format=infer_datetime_format)
File "/Library/Python/2.7/site-packages/pandas/io/parsers.py", line 645, in parser_f
return _read(filepath_or_buffer, kwds)
File "/Library/Python/2.7/site-packages/pandas/io/parsers.py", line 388, in _read
parser = TextFileReader(filepath_or_buffer, **kwds)
File "/Library/Python/2.7/site-packages/pandas/io/parsers.py", line 729, in __init__
self._make_engine(self.engine)
File "/Library/Python/2.7/site-packages/pandas/io/parsers.py", line 922, in _make_engine
self._engine = CParserWrapper(self.f, **self.options)
File "/Library/Python/2.7/site-packages/pandas/io/parsers.py", line 1389, in __init__
self._reader = _parser.TextReader(src, **kwds)
File "pandas/parser.pyx", line 373, in pandas.parser.TextReader.__cinit__ (pandas/parser.c:4175)
File "pandas/parser.pyx", line 667, in pandas.parse**strong text**r.TextReader._setup_parser_source (pandas/parser.c:8440)
IOError: File results\scoring\fed\score_peak.txt does not exist
我试图设置确切文件的路径 例如
答案 0 :(得分:2)
根据documentation of pandas 0.19.1 pandas.DataFrame.from_csv
不支持index_col = False
。尝试使用pandas.read_csv
代替(使用相同的参数)。还要确保使用最新版本的pandas。
看看是否有效:
import pandas as pd
def merge(peak_score, profile_score, res_file):
df_peak = pd.read_csv(peak_score, index_col = False, sep='\t')
df_profile = pd.read_csv(profile_score, index_col = False, sep='\t')
result = pd.concat([df_peak, df_profile], axis=1)
print result.head()
test = []
for a,b in zip(result['prot_a_p'],result['prot_b_p']):
if a == b:
test.append(1)
else:
test.append(0)
result['test']=test
result = result[result['test']==0]
del result['test']
result = result.fillna(0)
result.to_csv(res_file)
if __name__ == '__main__':
pass
关于从Windows更改为OS X时的路径问题:
在所有类型的Unix中,路径都使用斜杠/
编写,而在Windows中则使用反斜杠\
。由于OS X是Unix的后代,正如其他用户正确指出的那样,当您从Windows进行更改时,您需要调整路径。