Question

在Zeppelin中运行Spark bisecting kmmeans算法。

//I transform my data using the TF-IDF algorithm 

val idf = new IDF(minFreq).fit(data)
val hashIDF_features = idf.transform(dbTF)    

//and parse the transformed data to the clustering algorithm.

val bkm = new BisectingKMeans().setK(100).setMaxIterations(2)
val model = bkm.run(hashIDF_features)
val cluster_rdd = model.predict(hashIDF_features)

我总是得到这个错误：

org.apache.spark.SparkException: Job aborted due to stage failure: Task 0 in stage 270.0 failed 4 times, most recent failure: Lost task 0.3 in stage 270.0 (TID 126885, IP): java.util.NoSuchElementException: key not found: 67
    at scala.collection.MapLike$class.default(MapLike.scala:228)
    at scala.collection.AbstractMap.default(Map.scala:58)
    at scala.collection.MapLike$class.apply(MapLike.scala:141)
    at scala.collection.AbstractMap.apply(Map.scala:58)
    at org.apache.spark.mllib.clustering.BisectingKMeans$$anonfun$org$apache$spark$mllib$clustering$BisectingKMeans$$updateAssignments$1$$anonfun$2.apply$mcDJ$sp(BisectingKMeans.scala:338)
    at org.apache.spark.mllib.clustering.BisectingKMeans$$anonfun$org$apache$spark$mllib$clustering$BisectingKMeans$$updateAssignments$1$$anonfun$2.apply(BisectingKMeans.scala:337)
    at org.apache.spark.mllib.clustering.BisectingKMeans$$anonfun$org$apache$spark$mllib$clustering$BisectingKMeans$$updateAssignments$1$$anonfun$2.apply(BisectingKMeans.scala:337)
    at scala.collection.TraversableOnce$$anonfun$minBy$1.apply(TraversableOnce.scala:231)
    at scala.collection.LinearSeqOptimized$class.foldLeft(LinearSeqOptimized.scala:111)
    at scala.collection.immutable.List.foldLeft(List.scala:84)
    at scala.collection.LinearSeqOptimized$class.reduceLeft(LinearSeqOptimized.scala:125)
    at scala.collection.immutable.List.reduceLeft(List.scala:84)
    at scala.collection.TraversableOnce$class.minBy(TraversableOnce.scala:231)
    at scala.collection.AbstractTraversable.minBy(Traversable.scala:105)
    at org.apache.spark.mllib.clustering.BisectingKMeans$$anonfun$org$apache$spark$mllib$clustering$BisectingKMeans$$updateAssignments$1.apply(BisectingKMeans.scala:337)
    at org.apache.spark.mllib.clustering.BisectingKMeans$$anonfun$org$apache$spark$mllib$clustering$BisectingKMeans$$updateAssignments$1.apply(BisectingKMeans.scala:334)
    at scala.collection.Iterator$$anon$11.next(Iterator.scala:328)
    at scala.collection.Iterator$$anon$14.hasNext(Iterator.scala:389)
    at org.apache.spark.util.collection.ExternalSorter.insertAll(ExternalSorter.scala:189)
    at org.apache.spark.shuffle.sort.SortShuffleWriter.write(SortShuffleWriter.scala:64)
    at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:73)
    at org.apache.spark.scheduler.ShuffleMapTask.runTask(ShuffleMapTask.scala:41)
    at org.apache.spark.scheduler.Task.run(Task.scala:89)
    at org.apache.spark.executor.Executor$TaskRunner.run(Executor.scala:227)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)
Driver stacktrace:
    at org.apache.spark.scheduler.DAGScheduler.org$apache$spark$scheduler$DAGScheduler$$failJobAndIndependentStages(DAGScheduler.scala:1433)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1421)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$abortStage$1.apply(DAGScheduler.scala:1420)
    at scala.collection.mutable.ResizableArray$class.foreach(ResizableArray.scala:59)
    at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:47)
    at org.apache.spark.scheduler.DAGScheduler.abortStage(DAGScheduler.scala:1420)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:801)
    at org.apache.spark.scheduler.DAGScheduler$$anonfun$handleTaskSetFailed$1.apply(DAGScheduler.scala:801)
    at scala.Option.foreach(Option.scala:236)
    at org.apache.spark.scheduler.DAGScheduler.handleTaskSetFailed(DAGScheduler.scala:801)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.doOnReceive(DAGScheduler.scala:1642)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1601)
    at org.apache.spark.scheduler.DAGSchedulerEventProcessLoop.onReceive(DAGScheduler.scala:1590)
    at org.apache.spark.util.EventLoop$$anon$1.run(EventLoop.scala:48)
    at org.apache.spark.scheduler.DAGScheduler.runJob(DAGScheduler.scala:622)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1856)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1869)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1882)
    at org.apache.spark.SparkContext.runJob(SparkContext.scala:1953)
    at org.apache.spark.rdd.RDD$$anonfun$collect$1.apply(RDD.scala:934)
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:150)
    at org.apache.spark.rdd.RDDOperationScope$.withScope(RDDOperationScope.scala:111)
    at org.apache.spark.rdd.RDD.withScope(RDD.scala:323)
    at org.apache.spark.rdd.RDD.collect(RDD.scala:933)
    at org.apache.spark.mllib.clustering.BisectingKMeans$.org$apache$spark$mllib$clustering$BisectingKMeans$$summarize(BisectingKMeans.scala:261)
    at org.apache.spark.mllib.clustering.BisectingKMeans$$anonfun$run$1.apply$mcVI$sp(BisectingKMeans.scala:194)
    at scala.collection.immutable.Range.foreach$mVc$sp(Range.scala:141)
    at org.apache.spark.mllib.clustering.BisectingKMeans.run(BisectingKMeans.scala:189)
    at $iwC$$iwC$$iwC$$iwC$$iwC$$$$93297bcd59dca476dd569cf51abed168$$$$$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:89)
    at $iwC$$iwC$$iwC$$iwC$$iwC$$$$93297bcd59dca476dd569cf51abed168$$$$$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:95)
    at $iwC$$iwC$$iwC$$iwC$$iwC$$$$93297bcd59dca476dd569cf51abed168$$$$$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:97)
    at $iwC$$iwC$$iwC$$iwC$$iwC$$$$93297bcd59dca476dd569cf51abed168$$$$$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:99)
    at $iwC$$iwC$$iwC$$iwC$$iwC$$$$93297bcd59dca476dd569cf51abed168$$$$$$iwC$$iwC$$iwC$$iwC$$iwC$$iwC.<init>(<console>:101)

我使用Spark 1.6.1。有趣的是，如果我在一个独立的应用程序上运行这个算法，它不会出现错误，但我在Zeppelin中得到了这个。除此之外，输入已经由外部算法计算，所以我不认为这是格式化问题。有什么想法吗？

编辑：我使用较少量的群集再次测试系统，并且不会发生错误。为什么算法会破坏大型群集值？

Answer 1

我认为这个问题是因为closure。当你在本地运行你的应用程序时，一切都可能在同一个内存/进程中运行。所以确保你没有尝试从可能在其他内存/进程中运行的clousre访问本地变量。 This将有助于解决您的问题。

Answer 2

我也面临同样的问题，我也向Spark JIRA报告了这个问题，但没有得到任何回应。 https://issues.apache.org/jira/browse/SPARK-16473

Spark抛出java.util.NoSuchElementException：找不到密钥：67

2 个答案: