Question

我最近删除了几个R包（使用remove.packages（）），并重新安装了他们的最新版本。我尝试使用以下语法重新安装库网格：

url <- "https://cran.r-project.org/src/contrib/Archive/grid/grid_0.7-4.tar.gz"
pkgFile <- "grid_0.7-4.tar.gz"
download.file(url = url, destfile = pkgFile)
install.packages(pkgs=pkgFile, type="source", repos=NULL)
unlink(pkgFile)

我收到以下警告和错误：

Error : Invalid DESCRIPTION file

Invalid package name.
This is the name of a base package.

See section 'The DESCRIPTION file' in the 'Writing R Extensions'
manual.

ERROR: installing package DESCRIPTION failed for package ‘grid’
* removing ‘/Library/Frameworks/R.framework/Versions/3.3/Resources/library/grid’
Warning in install.packages :
  installation of package ‘/Users/lindz/RNASeqVisualization/grid_0.7-4.tar.gz’ had non-zero exit status

似乎网格现在是基础R的一部分，所以我暂时继续前进。但是，在使用：

重新安装包ggplot2时

install.packages("ggplot2")

我收到了以下警告：

Warning in install.packages :
  URL 'https://R-Forge.R-project.org/src/contrib/PACKAGES.gz': status was '400 Bad Request'

Warning in install.packages :
  URL 'https://R-Forge.R-project.org/src/contrib/PACKAGES': status was '400 Bad Request'
Warning in install.packages :
  unable to access index for repository https://R-Forge.R-project.org/src/contrib:
  cannot download all files

Warning in install.packages :
  URL 'https://R-Forge.R-project.org/src/contrib/PACKAGES.gz': status was '400 Bad Request'

Warning in install.packages :
  URL 'https://R-Forge.R-project.org/src/contrib/PACKAGES': status was '400 Bad Request'
Warning in install.packages :
  unable to access index for repository https://R-Forge.R-project.org/src/contrib:
  cannot download all files
Warning in install.packages :
  dependency ‘grid’ is not available
Warning in install.packages :
  unable to access index for repository https://www.stats.ox.ac.uk/pub/RWin/bin/macosx/mavericks/contrib/3.3:
  Line starting '<!DOCTYPE html> ...' is malformed!
Warning in install.packages :
  URL 'http://www.omegahat.net/R/bin/macosx/mavericks/contrib/3.3/PACKAGES.gz': status was '404 Not Found'
Warning in install.packages :
  URL 'http://www.omegahat.net/R/bin/macosx/mavericks/contrib/3.3/PACKAGES': status was '404 Not Found'
Warning in install.packages :
  unable to access index for repository http://www.omegahat.net/R/bin/macosx/mavericks/contrib/3.3:
  cannot download all files
Warning in install.packages :
  URL 'https://R-Forge.R-project.org/bin/macosx/mavericks/contrib/3.3/PACKAGES.gz': status was '400 Bad Request'
Warning in install.packages :
  URL 'https://R-Forge.R-project.org/bin/macosx/mavericks/contrib/3.3/PACKAGES': status was '400 Bad Request'
Warning in install.packages :
  unable to access index for repository https://R-Forge.R-project.org/bin/macosx/mavericks/contrib/3.3:
  cannot download all files
Warning in install.packages :
  URL 'https://www.rforge.net/bin/macosx/mavericks/contrib/3.3/PACKAGES.gz': status was '404 Not Found'
Warning in install.packages :
  URL 'https://www.rforge.net/bin/macosx/mavericks/contrib/3.3/PACKAGES': status was '404 Not Found'
Warning in install.packages :
  unable to access index for repository https://www.rforge.net/bin/macosx/mavericks/contrib/3.3:
  cannot download all files

然后我跑了：

library(ggplot2)

我收到了错误：

Error : package ‘grid’ does not have a namespace
Error: package or namespace load failed for ‘ggplot2’

我不确定此时该怎么做。我看过类似的帖子（R error package grid does not have a namespace），但他们的解决方案对我来说不起作用。我没有在我的任何库中保存网格，因为我已经卸载它（使用remove.packages（））。

我的sessionInfo（）如下：

R version 3.3.1 (2016-06-21)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: OS X 10.9.5 (Mavericks)

locale:
[1] en_US.UTF-8/en_US.UTF-8/en_US.UTF-8/C/en_US.UTF-8/en_US.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
[1] ggenealogy_0.2.0

loaded via a namespace (and not attached):
[1] rsconnect_0.4.3 tools_3.3.1

非常感谢任何建议！

Answer 1

grid是一个红色的鲱鱼，它附带R，无需尝试重新安装（否则更新R本身）。

ggplot2你应该从CRAN或github安装，而不是R-forge。试试CRAN存储库。

ggplot2的命名空间加载失败，网格描述失败

1 个答案: