Graphx可视化

时间:2016-08-03 05:51:49

标签: apache-spark visualization spark-graphx

我正在寻找一种方法来可视化Spark的Graphx中构建的图形。据我所知,Graphx没有任何可视化方法,所以我需要将数据从Graphx导出到另一个图库,但我被困在这里。我遇到了这个网站:https://lintool.github.io/warcbase-docs/Spark-Network-Analysis/  但它没有帮助。我应该使用哪个库以及如何导出图表。

4 个答案:

答案 0 :(得分:12)

所以你可以做这样的事情

  1. 保存为gexf(图表交换格式)代码Manning | Spark GraphX in Action
  2. def toGexf[VD,ED](g:Graph[VD,ED]) : String = {
        "<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n" +
        "<gexf xmlns=\"http://www.gexf.net/1.2draft\" version=\"1.2\">\n" +
        "  <graph mode=\"static\" defaultedgetype=\"directed\">\n" +
        "    <nodes>\n" +
        g.vertices.map(v => "      <node id=\"" + v._1 + "\" label=\"" +
                            v._2 + "\" />\n").collect.mkString +
        "    </nodes>\n" +
        "    <edges>\n" +
        g.edges.map(e => "      <edge source=\"" + e.srcId +
                         "\" target=\"" + e.dstId + "\" label=\"" + e.attr +
                         "\" />\n").collect.mkString +
        "    </edges>\n" +
        "  </graph>\n" +
        "</gexf>"
    }
    
    1. 使用linkurious.js中的GEXF插件加载文件
    2. 示例:http://gregroberts.github.io

      enter image description here

答案 1 :(得分:3)

您可以使用Gephi中的zeppelind3。查看D3.js In Action by Elijah MeeksSpark GraphX in Action by Michael S. Malak

scala中的zeppelin和grapxInAction借来的js提供以下内容:

import org.apache.spark.graphx._
import scala.reflect.ClassTag

def drawGraph[VD:ClassTag,ED:ClassTag](g:Graph[VD,ED]) = {

val u = java.util.UUID.randomUUID
val v = g.vertices.collect.map(_._1)
println("""%html
<div id='a""" + u + """' style='width:960px; height:500px'></div> 
<style>
.node circle { fill: gray; }
.node text { font: 10px sans-serif;
     text-anchor: middle;
     fill: white; }
line.link { stroke: gray;
    stroke-width: 1.5px; }
</style>
<script src="//d3js.org/d3.v3.min.js"></script>
<script>
.var width = 960, height = 500;
var svg = d3.select("#a""" + u + """").append("svg")
.attr("width", width).attr("height", height);
var nodes = [""" + v.map("{id:" + _ + "}").mkString(",") + """];
var links = [""" + g.edges.collect.map(
e => "{source:nodes[" + v.indexWhere(_ == e.srcId) + 
"],target:nodes[" +
v.indexWhere(_ == e.dstId) + "]}").mkString(",") + """];
var link = svg.selectAll(".link").data(links);
link.enter().insert("line", ".node").attr("class", "link");
var node = svg.selectAll(".node").data(nodes);
var nodeEnter = node.enter().append("g").attr("class", "node")
nodeEnter.append("circle").attr("r", 8);
nodeEnter.append("text").attr("dy", "0.35em")
 .text(function(d) { return d.id; });
d3.layout.force().linkDistance(50).charge(-200).chargeDistance(300)
.friction(0.95).linkStrength(0.5).size([width, height])
.on("tick", function() {
link.attr("x1", function(d) { return d.source.x; })
  .attr("y1", function(d) { return d.source.y; })
  .attr("x2", function(d) { return d.target.x; })
  .attr("y2", function(d) { return d.target.y; });
node.attr("transform", function(d) {
return "translate(" + d.x + "," + d.y + ")";
});
}).nodes(nodes).links(links).start();
</script>
 """)
 }

答案 2 :(得分:1)

如果您使用的是grpahFrames,那么我已经修改了@Karol Sudol在他对GraphFrames的答复中提供的代码:

    def drawGraph[vertices:ClassTag,relations:ClassTag](g:GraphFrame) = {

    val u = java.util.UUID.randomUUID
    val v = g.vertices.select("id")


    val vertexes: Array[String] = g.vertices.select("id").rdd.map(x => x(0).toString).collect()

    val edges: Array[Array[String]] = g.edges.select("src", "dst").rdd.map(r => Array(r(0).toString, r(1).toString)).collect()

    val edgeCreation = edges.map{ edgeArray =>
   "{source:nodes["+ vertexes.indexOf(edgeArray(0).trim()) +"],target:nodes["+ vertexes.indexOf(edgeArray(1).trim())+"]}"
  }


  println("""
    <!DOCTYPE html>
     <html lang="en">
     <head>
     <meta charset="utf-8">
     <title>Graph</title>
     <div id='a""" + u + """' style='width:960px; height:500px'></div>
    <style>
    .node circle { fill: gray; }
    .node text { font: 10px sans-serif;        
    text-anchor: middle;
    fill: white; }
    line.link { stroke: gray;
    stroke-width: 1.5px; }
    </style>
    <script src="https://d3js.org/d3.v3.min.js"></script>
    </head>
    <body>
    <script>
    var width = 960, height = 500;
    var svg = d3.select("#a""" + u + """").append("svg")
    .attr("width", width).attr("height", height);
    var nodes = [""" + vertexes.map("{id:\"" + _ + "\"}").mkString(",") + """];
    var links = ["""+ edgeCreation.mkString(",") + """];
    var link = svg.selectAll(".link").data(links);
    link.enter().insert("line", ".node").attr("class", "link");
    var node = svg.selectAll(".node").data(nodes);
    var nodeEnter = node.enter().append("g").attr("class", "node")
    nodeEnter.append("circle").attr("r", 8);
    nodeEnter.append("text").attr("dy", "0.35em")
     .text(function(d) { return d.id; });
    d3.layout.force().linkDistance(50).charge(-200).chargeDistance(300)
    .friction(0.95).linkStrength(0.5).size([width, height])
    .on("tick", function() {
    link.attr("x1", function(d) { return d.source.x; })
      .attr("y1", function(d) { return d.source.y; })
      .attr("x2", function(d) { return d.target.x; })
      .attr("y2", function(d) { return d.target.y; });
    node.attr("transform", function(d) {
    return "translate(" + d.x + "," + d.y + ")";
    });
    }).nodes(nodes).links(links).start();
    </script>
    </body>
    </html>
     """)

}

答案 3 :(得分:0)

您可以使用echats,一种简单的工具来可视化您的图表。链接:baidu echats

demos in this site

您只能从远程网址获取json数据,并可视化您的数据。