Question

我最近发现了holoviews，而hv.Image方法是plt.image的一个很好的替代方法。有一个非常酷的功能叫hv.HoloMap，允许用户输入一个函数并调整函数内的参数，以交互方式查看生成的2D数组。我尝试了一些启动HoloMap对象和另一个dynamicMap对象的示例，但无法使用它来处理我的数据。（http://holoviews.org/Tutorials/Showcase.html）

在我的真实数据集中，我将拥有3D数组，我想沿着轴（在这种情况下为z）切片，在那里我可以交互式地查看生成的切片。我在numpy和xarray下面做了一个基本的例子：

如何使用image_slice（或z）对象构建基本函数hv.HoloMap（迭代hv.dynamicMap维度）以查看2D切片我的3D DataArray？

import xarray as xr
import numpy as np
import holoviews as hv; hv.notebook_extension()


#Building 2D Array (X & Y)
dist = np.linspace(-0.5,0.5,202)   # Linear spatial sampling
XY,YX = np.meshgrid(dist, dist)

#Add along 3rd Dimension
Z_list = []
for i in range(10):
    Z_list.append(xr.DataArray(XY*i,dims=["x","y"]))

#Concat list of 2D Arrays into a 3D Array
DA_3D = xr.concat(Z_list,dim="z")
# DA_3D.shape 
# (10, 202, 202)

def image_slice(DA_var,k):
    return(hv.Image(DA_var[k,:,:].values))

#http://holoviews.org/Tutorials/Showcase.html Interactive Exploration w/ Circular Wave example
keys = [(DA_3D,k) for k in range(10)] #Every combination
items = [(k, image_slice(*k)) for k in keys] 
# visual_slice = hv.HoloMap(items)
# TypeError: unhashable type: 'DataArray


dmap = hv.DynamicMap(slice_image, kdims=[hv.Dimension('z_axis',range=(0, 10))])
# dmap
# TypeError: slice_image() missing 1 required positional argument: 'k'
# Which makes perfect sense because the first argument is the DataArray object but I don't know how to input that into this type of object since `hv.Dimension` requires a range

我使用Python 3.5.1和Holoviews Version((1, 4, 3),

Answer 1

首先感谢您的兴趣，我是HoloViews的作者之一。了解HoloMap和DynamicMap之间的区别非常重要。

HoloMap非常类似于字典，您可以使用（键，值）对填充它，然后您可以使用小部件探索该数据的可视化。 DynamicMap在构造它时不包含任何项目，而是定义一个回调函数，该函数在窗口小部件（或您）请求特定密钥时进行评估。这意味着您可以在动态Dimension上定义连续范围或离散样本列表，从而可以探索比HoloMap更大的空间。

举个例子，您可以通过以下方式构建HoloMap和DynamicMap：

import xarray as xr
import numpy as np
import holoviews as hv; 
hv.notebook_extension()

#Building 2D Array (X & Y)
dist = np.linspace(-0.5,0.5,202)   # Linear spatial sampling
XY,YX = np.meshgrid(dist, dist)

#Add along 3rd Dimension
Z_list = []
for i in range(10):
    Z_list.append(xr.DataArray(XY*i,dims=["x","y"]))

#Concat list of 2D Arrays into a 3D Array
DA_3D = xr.concat(Z_list,dim="z")
# DA_3D.shape 
# (10, 202, 202)

def image_slice(k):
    return(hv.Image(DA_3D[k,:,:].values))

keys = list(range(10))

# Construct a HoloMap by evaluating the function over all the keys
hmap = hv.HoloMap([(k, image_slice(k)) for k in keys], kdims=['z_axis'])

# Construct a HoloMap by defining the sampling on the Dimension
dmap = hv.DynamicMap(image_slice, kdims=[hv.Dimension('z_axis', values=keys)])

如果您还有其他问题，可以Gitter加入我们。请注意，我们正在计划将xarray与HoloViews正确集成，因此您不必手动定义HoloMap / DynamicMap来探索它是一个多维数组。

如何在Holoviews中使用HoloMap来查看2D数组切片（Python 3.5.1）

1 个答案: