Question

我有以下文档，我正在尝试使用Rstudio进行编译：

---
title:
shorttitle:
author: 

bibliography:
  - library.bib

output: papaja::apa6_pdf
---

```{r message = FALSE, warning = FALSE}
library("papaja")
apa_prepare_doc() # Prepare document for rendering
```
# Introduction

@Bakan1966

# References
```{r create_r-references}
r_refs(file = "r-references.bib")
```

当我运行knit时，它会编译.md文件，但是pandoc会出错：

pandoc-citeproc: "stdin" (line 232, column 2):
unexpected "a"
expecting "c", "C", "p", "P", "s" or "S"
pandoc: Error running filter /Applications/RStudio.app/Contents/MacOS/pandoc/pandoc-citeproc
Error: pandoc document conversion failed with error 83
In addition: Warning messages:
1: In yaml::yaml.load(enc2utf8(string), ...) :
  NAs introduced by coercion: 1,2,3 is not an integer
2: In yaml::yaml.load(enc2utf8(string), ...) :
  NAs introduced by coercion: 1,2,3 is not an integer
Execution halted

我在不同的主题上发现了类似的问题，但提议的解决方案都没有为我工作......

Answer 1

"Solved".

The problem comes from my library.bib file.

I have generated it using Mendeley, which has inserted a lot of special characters that are not supported by pandoc-citeproc...

Answer 2

这可能是pandoc-citeproc问题。要进行诊断，请手动运行rmarkdown::render，例如： rmarkdown::render(output_format = "html_document", input = your_vignette, clean = FALSE)

就我而言，我需要将.bib添加到小插图的YAML标题中的bibliography: bibfile行。

Answer 3

在编织应用arules::apriori()的rmarkdown文件时遇到错误83。

---
title: "[**Pattern Discovery in Data Mining** *Programming Assignment: Frequent Itemset Mining Using Apriori*](https://www.coursera.org/learn/data-patterns)"
subtitle: "[**Data Mining** *by University of Illinois at Urbana-Champaign*](https://www.coursera.org/specializations/data-mining)"
author: "[®γσ, Eng Lian Hu](http://englianhu.wordpress.com) <img src='figure/ShirotoNorimichi2.jpg' width='24'> 白戸則道®"
date: "`r Sys.Date()`"
output:
  tufte::tufte_html:
    toc: yes
  tufte::tufte_handout:
    citation_package: natbib
    latex_engine: xelatex
  tufte::tufte_book:
    citation_package: natbib
    latex_engine: xelatex
bibliography: skeleton.bib
link-citations: yes
---

删除该行后，其工作正常：bibliography: skeleton.bib。

Answer 4

如果您使用的是Mac，请打开终端并输入：

brew install pandoc-citeproc

或

brew upgrade pandoc-citeproc

如果无法正常工作，则需要降级到pandoc-citeproc的某个正常工作版本。

Answer 5

呈现HTML文件时我遇到了相同的错误，但是解决我的问题的方法却有所不同：

我在YAML标头中指定了csl: nature.csl。我不知道的是，我还必须下载nature.csl文件，并在YAML标头中指定其路径。所以不用：

bibliography: references/library.bib
csl: nature.csl

我下载了nature.csl文件，并放入了library.bib所在的文件夹中。正确的YAML标头看起来像这样

bibliography: references/library.bib
csl: references/nature.csl

带有Rmarkdown文件的pandoc-citeproc错误83

5 个答案: