R无法参考/无法找到已编译的已加载C代码

时间:2016-04-05 23:17:23

标签: c r statistics

我在R中创建了一个新的Robust HoltWinters函数(基于stats :: Holt-Winters)方法(per"具有指数和Holt-Winters的稳健预测) 平滑"作者:Sarah Gelper1,Roland Fried,Christophe Croux。 2008年9月26日。)为什么?嗯......为什么不呢!但我离题了......

stats :: Holt-Winters方法的核心是一个名为C_HoltWinters的C代码,我已将其修改为健壮(见下文)

p<-rep(1:length(b),b)
as.list(sapply(1:length(b), function(x) {sum(as.numeric(a)[which(p==x)])}))

所以我在windows 叹息中用R(3.2.2)编译它:

#include <stdlib.h>
#include <string.h>  // memcpy
#include <math.h>

#include <R.h>
#include "ts.h"

void HoltWinters (
          double *x, /*as.double(x) */
          double *x_adj, /*Adjust time series data, if need be                   Added*/
          int    *xl, /*lenx - Length of the current time series*/
          double *alpha, /*as.double(max(min(alpha, 1), 0)), */
          double *beta, /*as.double(max(min(beta,1), 0)), */
          double *gamma, /*as.double(max(min(gamma, 1), 0)), */ 
          double *llamda,/*as.double(max(min(llamda,1),0)),                     ADDED*/
          int    *start_time, /*as.integer(start.time),  */
          int    *seasonal, /*as.integer(!+(seasonal == "multiplicative")), */
          int    *period, /* as.integer(f),  */
          int    *dotrend, /* as.integer(!is.logical(beta) || beta),  */
          int    *doseasonal, /* as.integer(!is.logical(gamma) || gamma), */

          double *a, /*l.start - starting values for level*/
          double *b, /*b.start - starting values for Trend*/
          double *s, /*s.start - starting values for SEasonal*/
          double *l, /*t.start - starting values for LLamda                      ADDED*/
          double *k, /* Value for K                                              ADDED*/
          double *ck, /*value for ck                                             ADDED*/
          /* return values */
          double *SSE,
          double *level,
          double *trend,
          double *season

    )

{
    double res = 0, xhat = 0, stmp = 0, theta = 1, RhoK = 0, phi = 0 ;
    int i, i0, s0; /*i is the current t, i0 is the current LESS starting period, and s0 = is the seasonal current LESS Starting period*/

    /* copy start values to the beginning of the vectors */
    level[0] = *a;
    if (*dotrend == 1) trend[0] = *b;
    if (*doseasonal == 1) memcpy(season, s, *period * sizeof(double));

    for (i = *start_time - 1; i < *xl; i++) {
    /* indices for period i */
    i0 = i - *start_time + 2;
    s0 = i0 + *period - 1;

    /* forecast *for* period i */
    xhat = level[i0 - 1] + (*dotrend == 1 ? trend[i0 - 1] : 0);

    stmp = *doseasonal == 1 ? season[s0 - *period] : (*seasonal != 1);


    if (*seasonal == 1)
        xhat += stmp;
    else
        xhat *= stmp;

    /* Sum of Squared Errors */
    res   = x[i] - xhat;

    /*adjusting for robustness....Gahds*/
    RhoK = (abs(res / theta) <= *k ? *ck * (1 - pow(1 - pow((res / (*k * theta)),2),3)): *ck);
    theta = sqrt(*llamda * RhoK * pow(theta,2) + (1 - *llamda) * pow(theta,2));
    phi = (abs(res / theta) < *k ? res / theta : ((res / theta) / abs(res / theta) * (*k)));
    x_adj[i] = phi * theta + xhat;

    res = x_adj[i] - xhat;

    *SSE += res * res;

    /* estimate of level *in* period i */
    if (*seasonal == 1)
        level[i0] = *alpha       * (x_adj[i] - stmp)
              + (1 - *alpha) * (level[i0 - 1] + trend[i0 - 1]);
    else
        level[i0] = *alpha       * (x_adj[i] / stmp)
              + (1 - *alpha) * (level[i0 - 1] + trend[i0 - 1]);

    /* estimate of trend *in* period i */
    if (*dotrend == 1)
        trend[i0] = *beta        * (level[i0] - level[i0 - 1])
              + (1 - *beta)  * trend[i0 - 1];

    /* estimate of seasonal component *in* period i */
    if (*doseasonal == 1) {
        if (*seasonal == 1)
        season[s0] = *gamma       * (x_adj[i] - level[i0])
               + (1 - *gamma) * stmp;
        else
        season[s0] = *gamma       * (x_adj[i] / level[i0])
               + (1 - *gamma) * stmp;
    }
    }
}

将其加载到R:

R CMD SHLIB C_R_HoltWinters.c
gcc -m64 -I"C:/PROGRA~1/R/R-32~1.2/include" -DNDEBUG     -I"d:/RCompile/r-compiling/local/local320/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c C_R_HoltWinters.c -o C_R_HoltWinters.o
gcc -m64 -shared -s -static-libgcc -o C_R_HoltWinters.dll tmp.def C_R_HoltWinters.o -Ld:/RCompile/r-compiling/local/local320/lib/x64 -Ld:/RCompile/r-compiling/local/local320/lib -LC:/PROGRA~1/R/R-32~1.2/bin/x64 -lR

检查它是否在那里

dyn.load('C_R_HoltWinters.dll')
是啊,是的,是的。所以,只是对于大便和笑声,我对它进行了测试:

    > getLoadedDLLs()
                                                                                     Filename Dynamic.Lookup
base                                                                                     base          FALSE
utils                           C:/Program Files/RRO/R-3.2.2/library/utils/libs/x64/utils.dll          FALSE
methods                     C:/Program Files/RRO/R-3.2.2/library/methods/libs/x64/methods.dll          FALSE
RevoUtilsMath   C:/Program Files/RRO/R-3.2.2/library/RevoUtilsMath/libs/x64/RevoUtilsMath.dll           TRUE
grDevices               C:/Program Files/RRO/R-3.2.2/library/grDevices/libs/x64/grDevices.dll          FALSE
graphics                  C:/Program Files/RRO/R-3.2.2/library/graphics/libs/x64/graphics.dll          FALSE
stats                           C:/Program Files/RRO/R-3.2.2/library/stats/libs/x64/stats.dll          FALSE
tools                           C:/Program Files/RRO/R-3.2.2/library/tools/libs/x64/tools.dll          FALSE
internet                                    C:/PROGRA~1/RRO/R-32~1.2/modules/x64/internet.dll           TRUE
(embedding)                                                                       (embedding)          FALSE
C_R_HoltWinters                                              C:/scripts/R/C_R_HoltWinters.dll           TRUE

好的......应该在那里,但事实并非如此。也许它知道我不知道的事情,所以我试着去运行它:

 > is.loaded('C_R_HoltWinters')
[1] FALSE
> is.loaded("C_R_HoltWinters")
[1] FALSE
> is.loaded(C_R_HoltWinters)
Error in is.loaded(C_R_HoltWinters) : object 'C_R_HoltWinters' not found

但是当我加载一个名为foo的不同c代码并运行它时,运行正常。

为什么没有能够引用C_R_HoltWinters.dll?如果我把它放入包中,这也会破坏吗?

由于

1 个答案:

答案 0 :(得分:0)

好的,这里的问题是符号名称(可能代表C中的函数)和共享库之间的混淆。运行dyn.load('C_R_HoltWinters.dll')后,您可以通过查看getLoadedDlls()来检查它是否已加载。现在,is.loaded正在寻找的是在此DLL中定义的符号。因此,以下代码将向您显示可以从R调用C代码中定义的函数“HoltWinters”:

>  is.loaded("HoltWinters")
[1] TRUE

这是你应该在.C调用上使用的函数名。