我使用JNI,JNA,BridJ和JavaCPP多次重建我的Java / C ++项目,每次遇到随机(不可预测)的分段错误。我已经验证了使用这个库的纯C ++可执行文件永远不会导致分段错误,而在BridJ的情况下,通过显式调用它将其缩小到Java的垃圾收集器。
有人想到这些库正在创建Java端指针对象,当它们被垃圾收集(通过free
)时调用delete
或finalize
而不是处理C ++返回的指针作为借用的参考文献,在本申请中应该如此。
但是我已经尝试了一个额外的测试(下面没有表示):我将API中的每个指针都转换为int64_t
(Java中的long
)并显式地转换为适当的类型C ++。我仍然看到罕见的段错误。
所以我的问题很广泛:可能导致这个问题的原因是什么?我会接受使用JNA或BridJ的答案,因为我可以轻松地在这两者之间切换。我想我错过了一个基本问题,因为这个问题在我尝试过的所有图书馆中都非常普遍。
具体而言,这是我的JNA版本。我链接到CERN ROOT库。 RootTreeReader.h是:
#ifndef ROOTTREEREADER_H
#define ROOTTREEREADER_H
#include <TFile.h>
#include <TTreeReader.h>
#include <TTreeReaderValue.h>
#include <TTreeReaderArray.h>
using namespace ROOT::Internal;
extern "C" {
TFile *newFile(const char *fileLocation);
TTreeReader *newReader(TFile *file, const char *treeLocation);
bool readerNext(TTreeReader *reader);
TTreeReaderValueBase *newValue_float(TTreeReader *reader, const char *name);
float getValue_float(TTreeReaderValueBase *value);
}
#endif // ROOTTREEREADER_H
RootTreeReader.cpp是:
#include <string>
#include "RootTreeReader.h"
TFile *newFile(const char *fileLocation) {
return TFile::Open(fileLocation);
}
TTreeReader *newReader(TFile *file, const char *treeLocation) {
return new TTreeReader(treeLocation, file);
}
bool readerNext(TTreeReader *reader) {
return reader->Next();
}
TTreeReaderValueBase *newValue_float(TTreeReader *reader, const char *name) {
return new TTreeReaderValue<float>(*reader, name);
}
float getValue_float(TTreeReaderValueBase *value) {
return *((float*)value->GetAddress());
}
他们的Makefile是
all: RootTreeReader.cpp
mkdir -p ../../../target/native/linux-x86-64
g++ RootTreeReader.cpp -o ../../../target/native/linux-x86-64/libRootTreeReader.so \
-fPIC -shared \
-Wl,--no-as-needed $(shell root-config --cflags --ldflags --libs) -lTreePlayer
JNAerator生成以下RootTreeReaderLibrary.java:
package org.dianahep.scaroot;
import com.sun.jna.Library;
import com.sun.jna.Native;
import com.sun.jna.NativeLibrary;
import com.sun.jna.Pointer;
import com.sun.jna.PointerType;
/**
* JNA Wrapper for library <b>RootTreeReader</b><br>
* This file was autogenerated by <a href="http://jnaerator.googlecode.com/">JNAerator</a>,<br>
* a tool written by <a href="http://ochafik.com/">Olivier Chafik</a> that <a href="http://code.google.com/p/jnaerator/wiki/CreditsAndLicense">uses a few opensource projects.</a>.<br>
* For help, please visit <a href="http://nativelibs4java.googlecode.com/">NativeLibs4Java</a> , <a href="http://rococoa.dev.java.net/">Rococoa</a>, or <a href="http://jna.dev.java.net/">JNA</a>.
*/
public interface RootTreeReaderLibrary extends Library {
public static final String JNA_LIBRARY_NAME = "RootTreeReader";
public static final NativeLibrary JNA_NATIVE_LIB = NativeLibrary.getInstance(RootTreeReaderLibrary.JNA_LIBRARY_NAME);
public static final RootTreeReaderLibrary INSTANCE = (RootTreeReaderLibrary)Native.loadLibrary(RootTreeReaderLibrary.JNA_LIBRARY_NAME, RootTreeReaderLibrary.class);
/**
* Original signature : <code>TFile* newFile(const char*)</code><br>
* <i>native declaration : src/main/cpp/RootTreeReader.h:5</i><br>
* @deprecated use the safer methods {@link #newFile(java.lang.String)} and {@link #newFile(com.sun.jna.Pointer)} instead
*/
@Deprecated
RootTreeReaderLibrary.TFile newFile(Pointer fileLocation);
/**
* Original signature : <code>TFile* newFile(const char*)</code><br>
* <i>native declaration : src/main/cpp/RootTreeReader.h:5</i>
*/
RootTreeReaderLibrary.TFile newFile(String fileLocation);
/**
* Original signature : <code>TTreeReader* newReader(TFile*, const char*)</code><br>
* <i>native declaration : src/main/cpp/RootTreeReader.h:6</i><br>
* @deprecated use the safer methods {@link #newReader(org.dianahep.scaroot.RootTreeReaderLibrary.TFile, java.lang.String)} and {@link #newReader(org.dianahep.scaroot.RootTreeReaderLibrary.TFile, com.sun.jna.Pointer)} instead
*/
@Deprecated
RootTreeReaderLibrary.TTreeReader newReader(RootTreeReaderLibrary.TFile file, Pointer treeLocation);
/**
* Original signature : <code>TTreeReader* newReader(TFile*, const char*)</code><br>
* <i>native declaration : src/main/cpp/RootTreeReader.h:6</i>
*/
RootTreeReaderLibrary.TTreeReader newReader(RootTreeReaderLibrary.TFile file, String treeLocation);
/**
* Original signature : <code>bool readerNext(TTreeReader*)</code><br>
* <i>native declaration : src/main/cpp/RootTreeReader.h:7</i>
*/
byte readerNext(RootTreeReaderLibrary.TTreeReader reader);
/**
* Original signature : <code>TTreeReaderValueBase* newValue_float(TTreeReader*, const char*)</code><br>
* <i>native declaration : src/main/cpp/RootTreeReader.h:9</i><br>
* @deprecated use the safer methods {@link #newValue_float(org.dianahep.scaroot.RootTreeReaderLibrary.TTreeReader, java.lang.String)} and {@link #newValue_float(org.dianahep.scaroot.RootTreeReaderLibrary.TTreeReader, com.sun.jna.Pointer)} instead
*/
@Deprecated
RootTreeReaderLibrary.TTreeReaderValueBase newValue_float(RootTreeReaderLibrary.TTreeReader reader, Pointer name);
/**
* Original signature : <code>TTreeReaderValueBase* newValue_float(TTreeReader*, const char*)</code><br>
* <i>native declaration : src/main/cpp/RootTreeReader.h:9</i>
*/
RootTreeReaderLibrary.TTreeReaderValueBase newValue_float(RootTreeReaderLibrary.TTreeReader reader, String name);
/**
* Original signature : <code>float getValue_float(TTreeReaderValueBase*)</code><br>
* <i>native declaration : src/main/cpp/RootTreeReader.h:11</i>
*/
float getValue_float(RootTreeReaderLibrary.TTreeReaderValueBase value);
public static class TFile extends PointerType {
public TFile(Pointer address) {
super(address);
}
public TFile() {
super();
}
};
public static class TTreeReader extends PointerType {
public TTreeReader(Pointer address) {
super(address);
}
public TTreeReader() {
super();
}
};
public static class TTreeReaderValueBase extends PointerType {
public TTreeReaderValueBase(Pointer address) {
super(address);
}
public TTreeReaderValueBase() {
super();
}
};
}
我称之为:
Native.setProtected(true)
println("Native.isProtected", Native.isProtected) // it's true on Linux; I've tried this with and without
val lib = RootTreeReaderLibrary.INSTANCE
println("one")
val file = lib.newFile("TrackResonanceNtuple.root")
println("two")
val reader = lib.newReader(file, "TrackResonanceNtuple/twoMuon")
println("three")
val mass = lib.newValue_float(reader, "mass_mumu")
println("four")
var counter = 0
while (lib.readerNext(reader) > 0) {
val num = lib.getValue_float(mass)
println(num)
counter += 1
// if (counter % 1000 == 0) {
// println("gc start")
// System.gc()
// println("gc end")
// }
}
println("five")
在有或没有显式垃圾收集器调用的情况下,它很少 。这个段错误的BridJ版本很少没有,经常带有显式的垃圾收集器调用。
答案 0 :(得分:4)
快速修复:
export LD_PRELOAD=/path/to/libjsig.so
问题是CERN ROOT尝试为与JDK相同的信号安装处理程序。 Oracle建议预加载libjsig.so
,它提供“信号链设施”,以解决这些问题:
https://docs.oracle.com/javase/6/docs/technotes/guides/vm/signal-chaining.html
吉姆编辑:
特别是对于ROOT框架,您可以通过调用
来关闭信号处理gSystem->ResetSignals();
可以在此ROOT留言板上找到讨论:https://root.cern.ch/phpBB3/viewtopic.php?t=8231