输入S4对象

时间:2010-08-12 10:10:16

标签: r s4

一个人dput()如何成为S4对象?我试过这个

require(sp)
require(splancs)
plot(0, 0, xlim = c(-100, 100), ylim = c(-100, 100))
poly.d <- getpoly() #draw a pretty polygon - PRETTY!
poly.d <- rbind(poly.d, poly.d[1,]) # close the polygon because of Polygons() and its kin
poly.d <- SpatialPolygons(list(Polygons(list(Polygon(poly.d)), ID = 1)))
poly.d
dput(poly.d)

请注意,如果我dput()一个S4对象,我无法重新构建它。你的想法?

1 个答案:

答案 0 :(得分:11)

目前看来,你不能dput这个对象。 dput的代码包含以下循环:

if (isS4(x)) {
    cat("new(\"", class(x), "\"\n", file = file, sep = "")
    for (n in slotNames(x)) {
        cat("    ,", n, "= ", file = file)
        dput(slot(x, n), file = file, control = control)
    }
    cat(")\n", file = file)
    invisible()
}

它以递归方式处理S4对象,但它依赖于假设S3对象不包含S4对象,在您的示例中不包含该对象:

> isS4(slot(poly.d,'polygons'))
[1] FALSE
> isS4(slot(poly.d,'polygons')[[1]])
[1] TRUE

修改:这是解决dput限制的方法。它适用于您提供的示例,但我认为它不会起作用(例如,它不处理属性)。

dput2 <- function (x,
                   file = "",
                   control = c("keepNA", "keepInteger", "showAttributes")){
    if (is.character(file))
        if (nzchar(file)) {
            file <- file(file, "wt")
            on.exit(close(file))
        }
        else file <- stdout()
    opts <- .deparseOpts(control)
    if (isS4(x)) {
        cat("new(\"", class(x), "\"\n", file = file, sep = "")
        for (n in slotNames(x)) {
            cat("    ,", n, "= ", file = file)
            dput2(slot(x, n), file = file, control = control)
        }
        cat(")\n", file = file)
        invisible()
    } else if(length(grep('@',capture.output(str(x)))) > 0){
      if(is.list(x)){
        cat("list(\n", file = file, sep = "")
        for (i in 1:length(x)) {
          if(!is.null(names(x))){
            n <- names(x)[i]
            if(n != ''){
              cat("    ,", n, "= ", file = file)
            }
          }
          dput2(x[[i]], file = file, control = control)
        }
        cat(")\n", file = file)
        invisible()
      } else {
        stop('S4 objects are only handled if they are contained within an S4 object or a list object')
      }
    }
    else .Internal(dput(x, file, opts))
}

这就是行动:

> dput2(poly.d,file=(tempFile <- tempfile()))
> poly.d2 <- dget(tempFile)
> all.equal(poly.d,poly.d2)
[1] TRUE