Generic" reduceBy"或" groupBy +聚合" Spark DataFrame的功能

时间:2015-12-24 18:27:14

标签: python apache-spark pyspark spark-dataframe

代码审核问题:Generic “reduceBy” or “groupBy + aggregate” functionality with Spark DataFrame

大家好。也许我在这里彻底改造了轮子,或者我发明了一些有用的东西。你们其中一个人可以告诉我是否有更好的方法吗?这就是我要做的事情:

我想要一个通用的reduceBy函数,它的工作方式类似于RDD的reduceByKey,但是我可以使用Spark DataFrame中的任何列。你可能会说我们已经拥有了它,它被称为groupBy,但据我所知,groupBy只允许你使用一些非常有限的选项进行聚合。我想groupBy,然后运行一个任意函数来聚合。有人已经这样做了吗?

基本上,我正在使用看起来像这样的Spark DataFrame ......

+----------+---------+-----+-------------+------------+-------------------+
| birthdate|favecolor| name|twitterhandle|facebookpage|           favesong|
+----------+---------+-----+-------------+------------+-------------------+
|2000-01-01|     blue|Alice|     allyblue|        null|               null|
|1999-12-31|     null|  Bob|         null|      BobbyG| Gangsters Paradise|
|      null|     null|Alice|         null|        null|Rolling in the Deep|
+----------+---------+-----+-------------+------------+-------------------+

...并按列名称缩小'得到这个:

+----------+---------+-------------------+-----+-------------+------------+
| birthdate|favecolor|           favesong| name|twitterhandle|facebookpage|
+----------+---------+-------------------+-----+-------------+------------+
|2000-01-01|     blue|Rolling in the Deep|Alice|     allyblue|        null|
|1999-12-31|     null| Gangsters Paradise|  Bob|         null|      BobbyG|
+----------+---------+-------------------+-----+-------------+------------+

我刚注意到列顺序的变化。我想我可以通过在开始之前注意架构来快速解决这个问题。但无论如何,我必须编写大量代码才能使其工作,这似乎是其他人应该已经完成​​的一个简单的操作。

这是用Python 3.5.1和Spark 1.5.2编写的代码:

 def addEmptyColumns(df, colNames):
     """
     https://lab.getbase.com/pandarize-spark-dataframes/

     :param df: 
     :param colNames: 
     :return:
     """
     exprs = df.columns + ["null as " + colName for colName in colNames]
     return df.selectExpr(*exprs)


 def concatTwoDfs(left, right):
     """
     https://lab.getbase.com/pandarize-spark-dataframes/

     :param left: 
     :param right: 
     :return:
     """
     # append columns from right df to left df
     missingColumnsLeft = set(right.columns) - set(left.columns)
     left = addEmptyColumns(left, missingColumnsLeft)

     # append columns from left df to right df
     missingColumnsRight = set(left.columns) - set(right.columns)
     right = addEmptyColumns(right, missingColumnsRight)

     # let's set the same order of columns
     right = right[left.columns]

      # finally, union them
     return left.unionAll(right)


 def reduce(function, iterable, initializer=None):
     """
     A copy of the rough code from Python 2's reduce function documentation.  Why did Python 3 get rid of it?

     Apply function of two arguments cumulatively to the items of iterable, from left to right, so as to reduce the
     iterable to a single value. For example, reduce(lambda x, y: x+y, [1, 2, 3, 4, 5]) calculates ((((1+2)+3)+4)+5).
     The left argument, x, is the accumulated value and the right argument, y, is the update value from the iterable.
     If the optional initializer is present, it is placed before the items of the iterable in the calculation, and
     serves as a default when the iterable is empty. If initializer is not given and iterable contains only one item,
     the first item is returned.

     :param function: use this function to reduce the elements of iterable
     :param iterable:
     :param initializer:
     :return:
     """
     it = iter(iterable)
     if initializer is None:
         try:
             initializer = next(it)
         except StopIteration:
             raise TypeError('reduce() of empty sequence with no initial value')
     accum_value = initializer
     for x in it:
         accum_value = function(accum_value, x)
     return accum_value


 def concat(dfs):
     """
     Concatenates two Spark dataframes intelligently, adding missing columns with 'null' entry where appropriate.
     https://lab.getbase.com/pandarize-spark-dataframes/

     :param dfs: a list or tuple of two Spark dataframes
     :return: single dataframe consisting of dfs' columns and data
     """
     return reduce(concatTwoDfs, dfs)


 def combine_rows(row1, row2):
     """
     Takes two rows assumed to have the same columns, combines them, using values from row1 when available, from row2
     otherwise.

     :param row1: pyspark.sql.Row
     :param row2: pyspark.sql.Row
     :return: pyspark.sql.Row combined from row1 and row2
     """
     from pyspark.sql import Row
     combined = {}
     for col in row1.asDict():
         if row1.asDict()[col] is not None:
             combined[col] = row1.asDict()[col]
         else:
             combined[col] = row2.asDict()[col]
     return Row(**combined)


 def remove_nones(row):
     """
     Takes in a row, returns that same row minus all of the columns that have a None entry.  This is required in
     order to create a new DataFrame using only this row; DataFrame will not be created if it doesn't know what kind
     of value to expect in a column.

     :param row:
     :return:
     """
     from pyspark.sql import Row
     cleaned = {}
     for col in row.asDict():
         if row.asDict()[col] is not None:
             cleaned[col] = row.asDict()[col]
     return Row(**cleaned)


 def reduce_by(df, col, func):
     """
     Does pretty much the same thing as an RDD's reduceByKey, but much more generic.  Kind of like a Spark DataFrame's
     groupBy, but lets you aggregate by any generic function.

     :param df: the DataFrame to be reduced
     :param col: the column you want to use for grouping in df
     :param func: the function you will use to reduce df
     :return: a reduced DataFrame
     """
     first_loop = True
     unique_entries = df.select(col).distinct().collect()
     return_rdd = sc.parallelize([])
     for entry in unique_entries:
         if first_loop:
             return_df = sqlContext.createDataFrame( \
                                 sc.parallelize([remove_nones(df.filter(df[col] == entry[0]).rdd.reduce(func))]))
             first_loop = False
         else:
             return_df = concat((return_df, \
                                sqlContext.createDataFrame( \
                                 sc.parallelize([remove_nones(df.filter(df[col] == entry[0]).rdd.reduce(func))]))))
     return return_df

然后通过创建一个名为test_df的DataFrame来运行它,并运行它:

reduce_by(test_df, 'name', combine_rows).show()

1 个答案:

答案 0 :(得分:1)

我认为,对于您的特定聚合需求,这也将起作用:

from pyspark.sql import SQLContext

data = sc.parallelize([("2000-01-01", "blue", "Alice", "allyblue", None, None),\
                      ("1999-12-31", None, "Bob", None, "BobbyG", "Gangsters Paradise"),\
                         (None, None, "Alice", None, None, "Rolling in the Deep") ])

df = sqlContext.createDataFrame(\
data, ["birthdate", "favecolor", "name", "twitterhandle", "facebookpage", "favesong"])

df = df.groupBy(df.name).agg({'birthdate': 'min', 'favecolor':'min', \
                        'twitterhandle':'min', 'facebookpage':'min', 'favesong':'min'})
print df.collect()

[Row(name=u'Alice', min(favesong)=u'Rolling in the Deep',
min(twitterhandle)=u'allyblue', min(favecolor)=u'blue', 
min(facebookpage)=u'null', min(birthdate)=u'2000-01-01'), Row(name=u'Bob',
min(favesong)=u'Gangsters Paradise', min(twitterhandle)=u'null', 
min(favecolor)=u'null', min(facebookpage)=u'BobbyG', min(birthdate)=u'1999-12-31')]