Question

我想为rgdal安装"R version 3.2.3 (2015-12-10)"。我下载并安装了

GDAL 1.11完成
PROJ framework v4.9.2-2
GEOS framework v3.5.0-1

然后在RStudio中输入了install.packages("rgdal")，它给了我这个：

> .... 
> 
> configure: CC: clang configure: CXX: clang++ configure: rgdal:
> 1.1-1 checking for /usr/bin/svnversion... yes configure: svn revision: 
> 572 checking for gdal-config... 
> no no configure: error: gdal-config
> not found or not executable. ERROR: configuration failed for package
> ‘rgdal’
> * removing ‘/Library/Frameworks/R.framework/Versions/3.2/Resources/library/rgdal’
> Warning in install.packages :   installation of package ‘rgdal’ had
> non-zero exit status

> sessionInfo()
R version 3.2.3 (2015-12-10)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: OS X 10.10.5 (Yosemite)

locale:
[1] de_AT.UTF-8/de_AT.UTF-8/de_AT.UTF-8/C/de_AT.UTF-8/de_AT.UTF-8

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

loaded via a namespace (and not attached):
[1] tools_3.2.3

我也尝试过终端

R CMD INSTALL rgdal_1.1-1.tar --configure-args='--with-gdal-config=/Library/Frameworks/GDAL.framework/Programs/gdal-config
 --with-proj-include=/Library/Frameworks/PROJ.framework/Headers
 --with-proj-lib=/Library/Frameworks/PROJ.framework/unix/lib'

和

sudo R CMD INSTALL –configure-args=’–with-proj-include=/usr/local/lib’ rgdal_1.1-1.tar

没有运气！

Answer 1

终于解决了它。

以下是我如何做到的！ OS X 10.10.5 R 3.2.3 GDAL 1.1

从here
通过在shell中键入此文件，告诉您的OS X在哪里找到gdal-config文件 echo 'export PATH=/Library/Frameworks/GDAL.framework/Programs:$PATH' >> ~/.bash_profile然后source ~/.bash_profile
输入bash gdalinfo --version，检查您的GDAL是否正常工作。这应该与GDAL 1.11.3, released 2015/09/16之类的东西一样。
对于大多数人来说，启动R并键入install.packages("rgdal")有效（如果您已完成步骤1-3）。但是，对我来说情况并非如此。所以，如果你还有麻烦，请继续进行。
转到GDAL网站并下载.tar文件。
在shell中，试试这个：sudo R CMD INSTALL –configure-args=’–with-proj-include=/usr/local/lib’ rgdal_1.1-1.tar。这仍然给了我一个错误：configure: error: proj_api.h not found in standard or given locations. ERROR: configuration failed for package ‘rgdal’
所以，你再次需要告诉在哪里找到那个。尝试： R CMD INSTALL rgdal_1.1-1.tar --configure-args='--with-gdal-config=/Library/Frameworks/GDAL.framework/Programs/gdal-config --with-proj-include=/Library/Frameworks/PROJ.framework/Headers --with-proj-lib=/Library/Frameworks/PROJ.framework/unix/lib'

那应该有用。尝试启动R并输入library(rgdal)。

注意：rgoes我遇到了类似的问题。 This帮助了我。试试：

R CMD INSTALL rgeos_0.3-15.tar --configure-args='--with-geos-config=/Library/Frameworks/GEOS.framework/unix/bin/geos-config
--with-proj-include=/Library/Frameworks/PROJ.framework/Headers
--with-proj-lib=/Library/Frameworks/PROJ.framework/unix/lib'

用于指向config文件。它在这里/Library/Frameworks/GEOS.framework/unix/bin/geos-config

Answer 2

快速记录@Stophface之前的回答，可能对某人有用：

我做了上面列出的所有步骤，但是终端中的rgdal安装仍然给了我configure: error: proj_api.h not found in standard or given locations的错误。然而（并且不知道究竟为什么），我设法使用几乎相同的规范从R.app安装它：

> install.packages('rgdal', type = "source", configure.args=c(
     '--with-gdal-config=/Library/Frameworks/GDAL.framework/Programs/gdal-config',
     '--with-proj-include=/Library/Frameworks/PROJ.framework/Headers',
     '--with-proj-lib=/Library/Frameworks/PROJ.framework/unix/lib'))

再次感谢您的回答！

Answer 3

我在macOS Sierra（10.12）上运行R 3.4.0时遇到了同样的错误。所以我用自制软件安装gdal，然后按照惯例安装rgdal在R

中终端

中的

brew update
brew install gdal

在R

install.packages("rgdal")

devtools::session_info()
Session info ----------------------------------------------------------------------------------------------------------------------------------------------
 setting  value                       
 version  R version 3.4.0 (2017-04-21)
 system   x86_64, darwin15.6.0        
 ui       RStudio (1.0.143)           
 language (EN)                        
 collate  en_AU.UTF-8                 
 tz       Australia/Melbourne         
 date     2017-04-24                  

Packages --------------------------------------------------------------------------------------------------------------------------------------------------
 package  * version date       source        
 devtools   1.12.0  2016-12-05 CRAN (R 3.4.0)
 digest     0.6.12  2017-01-27 CRAN (R 3.4.0)
 lattice    0.20-35 2017-03-25 CRAN (R 3.4.0)
 memoise    1.1.0   2017-04-21 CRAN (R 3.4.0)
 rgdal    * 1.2-6   2017-04-06 CRAN (R 3.4.0)
 sp       * 1.2-4   2016-12-22 CRAN (R 3.4.0)
 withr      1.0.2   2016-06-20 CRAN (R 3.4.0)

Answer 4

我通过我的Mac上的conda安装它（OS X 10.10.5）。安装很简单。如果您是康达新手，请查看此http://conda.pydata.org/docs/r-with-conda.html

conda install gdal
gdalinfo --version
# GDAL 2.1.0, released 2016/04/25

R包安装：

install.packages('rgdal', type = "source", configure.args=c(
    '--with-gdal-config=/Library/Frameworks/GDAL.framework/Programs/gdal-config',
    '--with-proj-include=/Library/Frameworks/PROJ.framework/Headers',
    '--with-proj-lib=/Library/Frameworks/PROJ.framework/unix/lib'))

install.packages('rgeos', type = "source", configure.args=c(
    '--with-gdal-config=/Library/Frameworks/GDAL.framework/Programs/gdal-config',
    '--with-proj-include=/Library/Frameworks/PROJ.framework/Headers',
    '--with-proj-lib=/Library/Frameworks/PROJ.framework/unix/lib'))

install.packages('maptools', dependencies=TRUE)

无法安装rgdal

4 个答案: