Question

我刚刚将R和R Studio升级到最新版本。

我正在尝试加载包RHRV，并且由于致命错误，R Studio会中止会话。它与以下错误相关联：

loading package: tcltk

xcrun: error: invalid active developer path (/Library/Developer/CommandLineTools), missing xcrun at: /Library/Developer/CommandLineTools/usr/bin/xcrun
Loading required package: tkrplot

命令：

库（＆＃34; tcltk＆＃34）

给出以下错误消息：

xcrun: error: invalid active developer path (/Library/Developer/CommandLineTools), missing xcrun at: /Library/Developer/CommandLineTools/usr/bin/xcrun
Warning message:
running command ''/usr/bin/otool' -L '/Library/Frameworks/R.framework/Resources/library/tcltk/libs//tcltk.so'' had status 1

运行以下命令会导致R Studio崩溃：

library("tkrplot")

以下是一些感兴趣的其他信息：

sessionInfo("tcltk")

R version 3.2.2 (2015-08-14)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: OS X 10.11 (El Capitan)

locale:
[1] en_CA.UTF-8/en_CA.UTF-8/en_CA.UTF-8/C/en_CA.UTF-8/en_CA.UTF-8

attached base packages:
[1] tcltk

loaded via a namespace (and not attached):
 [1] Rcpp_0.12.2         Formula_1.2-1       cluster_2.0.3       magrittr_1.5            splines_3.2.2       MASS_7.3-43         grDevices_3.2.2    
 [8] munsell_0.4.2       colorspace_1.2-6    lattice_0.20-33     minqa_1.2.4            stringr_1.0.0       plyr_1.8.3          tools_3.2.2        
[15] utils_3.2.2         nnet_7.3-10         grid_3.2.2          gtable_0.1.2            nlme_3.1-121        latticeExtra_0.6-26 stats_3.2.2        
[22] datasets_3.2.2      survival_2.38-3     lme4_1.1-10         digest_0.6.8        base_3.2.2          Matrix_1.2-2        gridExtra_2.0.0    
[29] RColorBrewer_1.1-2  nloptr_1.0.4        reshape2_1.4.1      ggplot2_1.0.1       acepack_1.3-3.3     graphics_3.2.2      effects_3.0-4      
[36] rpart_4.1-10        stringi_1.0-1       methods_3.2.2       scales_0.3.0            Hmisc_3.17-0        lmerTest_2.0-29     foreign_0.8-65     
[43] proto_0.3-10

sessionInfo("tkrplot")
R version 3.2.2 (2015-08-14)
Platform: x86_64-apple-darwin13.4.0 (64-bit)
Running under: OS X 10.11 (El Capitan)

locale:
[1] en_CA.UTF-8/en_CA.UTF-8/en_CA.UTF-8/C/en_CA.UTF-8/en_CA.UTF-8

attached base packages:
character(0)

other attached packages:
[1] tkrplot_0.0-23

loaded via a namespace (and not attached):
 [1] Rcpp_0.12.2         Formula_1.2-1       cluster_2.0.3       magrittr_1.5        splines_3.2.2       MASS_7.3-43         grDevices_3.2.2    
 [8] munsell_0.4.2       colorspace_1.2-6    lattice_0.20-33     minqa_1.2.4         stringr_1.0.0       plyr_1.8.3          tcltk_3.2.2        
[15] tools_3.2.2         utils_3.2.2         nnet_7.3-10         grid_3.2.2           gtable_0.1.2        nlme_3.1-121        latticeExtra_0.6-26
[22] stats_3.2.2         datasets_3.2.2      survival_2.38-3     lme4_1.1-10         digest_0.6.8        base_3.2.2          Matrix_1.2-2       
[29] gridExtra_2.0.0     RColorBrewer_1.1-2  nloptr_1.0.4        reshape2_1.4.1      ggplot2_1.0.1       acepack_1.3-3.3     graphics_3.2.2     
[36] effects_3.0-4       rpart_4.1-10        stringi_1.0-1       methods_3.2.2       scales_0.3.0        Hmisc_3.17-0        lmerTest_2.0-29    
[43] foreign_0.8-65      proto_0.3-10

马特

Answer 1

非常感谢Ben，我可以为这个问题提供解决方案。问题是El Capitan有一个不为人知的xcode问题。

打开终端应用程序并输入：

xcode-select --install

加载运行xcode所需的补丁需要几分钟。上面描述的错误在几个实例中突出显示，这就是解决方法。

然后我重新启动了我的计算机并直接从源代码加载了包“tkrplot”的代码：

install.packages("tkrplot", type="source")

完成这三个步骤后，我就可以毫无问题地加载包“RHRV”和相关软件包“tkrplot”和“tcltk”。

Answer 2

当您从源代码构建包时，您只会遇到“无效的活动开发人员路径”问题。如果您使用 CRAN 的预编译版本，则不必担心。试试

install.packages("tkrplot", type="binary")

升级R / R Studio后出现致命错误

2 个答案: